Evidence map›Paper›PMID 26039217›Full record

ArticleAmerican journal of respiratory cell and molecular biology2015

Activation of Transient Receptor Potential Ankyrin-1 by Insoluble Particulate Material and Association with Asthma.

Cassandra E Deering-Rice, Darien Shapiro, Erin G Romero, Chris Stockmann, Tatjana S Bevans, Quang M Phan, Bryan L Stone, Bernhard Fassl, Flory Nkoy, Derek A Uchida and 3 more

Open access · greenAbstract read
In one paragraph

Article in American journal of respiratory cell and molecular biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
2.9field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 60 citations in OpenAlex.

  1. Trial
  2. Trial
  3. Trial
  4. Article
  5. Article
  6. TRPA1, TRPV1, and Caffeine: Pain and Analgesia.International journal of molecular sciences · 2024
    Review
  7. Article
  8. Review
  9. Review
  10. Article
  11. Article
  12. Regulation of ThermoTRP Channels by PIP2 and Cholesterol.Advances in experimental medicine and biology · 2023
    Article
  13. Article
  14. Article
  15. Review
  16. Review
  17. TRP Channels as Cellular Targets of Particulate Matter.International journal of molecular sciences · 2021
    Review
  18. Effect ofJournal of personalized medicine · 2021
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 1 institution in 1 country.

Cassandra E Deering-Rice1 Department of Pharmacology and Toxicology, University of Utah, Salt Lake City, Utah; and.
Darien Shapiro1 Department of Pharmacology and Toxicology, University of Utah, Salt Lake City, Utah; and.
Erin G Romero1 Department of Pharmacology and Toxicology, University of Utah, Salt Lake City, Utah; and.
Chris Stockmann1 Department of Pharmacology and Toxicology, University of Utah, Salt Lake City, Utah; and.
Tatjana S Bevans1 Department of Pharmacology and Toxicology, University of Utah, Salt Lake City, Utah; and.
Quang M Phan1 Department of Pharmacology and Toxicology, University of Utah, Salt Lake City, Utah; and.
Bryan L Stone2 Department of Pediatrics, University of Utah School of Medicine, Salt Lake City, Utah.
Bernhard Fassl2 Department of Pediatrics, University of Utah School of Medicine, Salt Lake City, Utah.
Flory Nkoy2 Department of Pediatrics, University of Utah School of Medicine, Salt Lake City, Utah.
Derek A Uchida2 Department of Pediatrics, University of Utah School of Medicine, Salt Lake City, Utah.
Robert M Ward2 Department of Pediatrics, University of Utah School of Medicine, Salt Lake City, Utah.
John M Veranth1 Department of Pharmacology and Toxicology, University of Utah, Salt Lake City, Utah; and.
Christopher A Reilly1 Department of Pharmacology and Toxicology, University of Utah, Salt Lake City, Utah; and.
University of Utah · US

Funding

TRP Channels and Air PollutionR01ES017431 · NIEHS · UNIVERSITY OF UTAH · PI REILLY, CHRISTOPHER A · 2009 to 2024
$5.3M
P450 Metabolism of Glucocorticoids in Lungs of Pediatric AsthmaticsR01HD060559 · NICHD · UNIVERSITY OF UTAH · PI REILLY, CHRISTOPHER A · 2010 to 2014
$2.3M
NICHD NIH HHS R01 HD060559NIEHS NIH HHS R01 ES017431
6 · The paper itself

Abstract

Inhaled irritants activate transient receptor potential ankyrin-1 (TRPA1), resulting in cough, bronchoconstriction, and inflammation/edema. TRPA1 is also implicated in the pathogenesis of asthma. Our hypothesis was that particulate materials activate TRPA1 via a mechanism distinct from chemical agonists and that, in a cohort of children with asthma living in a location prone to high levels of air pollution, expression of uniquely sensitive forms of TRPA1 may correlate with reduced asthma control. Variant forms of TRPA1 were constructed by mutating residues in known functional elements and corresponding to single-nucleotide polymorphisms in functional domains. TRPA1 activity was studied in transfected HEK-293 cells using allyl-isothiocynate, a model soluble electrophilic agonist; 3,5-ditert butylphenol, a soluble nonelectrophilic agonist and a component of diesel exhaust particles; and insoluble coal fly ash (CFA) particles. The N-terminal variants R3C and R58T exhibited greater, but not additive, activity with all three agonists. The ankyrin repeat domain-4 single nucleotide polymorphisms E179K and K186N exhibited decreased response to CFA. The predicted N-linked glycosylation site residues N747A and N753A exhibited decreased responses to CFA, which were not attributable to differences in cellular localization. The pore-loop residue R919Q was comparable to wild-type, whereas N954T was inactive to soluble agonists but not CFA. These data identify roles for ankyrin domain-4, cell surface N-linked glycans, and selected pore-loop domain residues in the activation of TRPA1 by insoluble particles. Furthermore, the R3C and R58T polymorphisms correlated with reduced asthma control for some children, which suggest that TRPA1 activity may modulate asthma, particularly among individuals living in locations prone to high levels of air pollution.

Indexed as

AdolescentAsthmaCalcium ChannelsChildChild, PreschoolCoal AshGenetic Association StudiesGenetic Predisposition to DiseaseHEK293 CellsHumansNerve Tissue ProteinsPolymorphism, Single NucleotideProtein Structure, TertiaryProtein TransportTransient Receptor Potential ChannelsTRPA1 Cation ChannelCalcium ChannelsCoal AshNerve Tissue ProteinsTransient Receptor Potential ChannelsTRPA1 Cation ChannelTRPA1 protein, humanVehicle EmissionsCFAdiesellungSNPsTRPA1

Identifiers

PMID26039217
PMCPMC4742944
OpenAlexW1748577606

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.