Evidence map›Paper›PMID 26039158›Full record

ArticleJournal of the American Chemical Society2015

Closed and Semiclosed Interhelical Structures in Membrane vs Closed and Open Structures in Detergent for the Influenza Virus Hemagglutinin Fusion Peptide and Correlation of Hydrophobic Surface Area with Fusion Catalysis.

Ujjayini Ghosh, Li Xie, Lihui Jia, Shuang Liang, David P Weliky

Abstract read
In one paragraph

Article in Journal of the American Chemical Society, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. RapidBiochemistry · 2021
    Article
  9. Article
  10. Article
  11. Biochimica et biophysica acta. Biomembranes · 2020
    Article
  12. Influenza hemagglutinin drives viral entry via two sequential intramembrane mechanisms.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Charged N-terminus of Influenza Fusion Peptide Facilitates Membrane Fusion.International journal of molecular sciences · 2018
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Ujjayini GhoshDepartment of Chemistry, Michigan State University, East Lansing, Michigan 48824, United States.
Li XieDepartment of Chemistry, Michigan State University, East Lansing, Michigan 48824, United States.
Lihui JiaDepartment of Chemistry, Michigan State University, East Lansing, Michigan 48824, United States.
Shuang LiangDepartment of Chemistry, Michigan State University, East Lansing, Michigan 48824, United States.
David P WelikyDepartment of Chemistry, Michigan State University, East Lansing, Michigan 48824, United States.

Funding

Solid State NMR Studies of the HIV-1 Fusion PeptideR01AI047153 · NIAID · MICHIGAN STATE UNIVERSITY · PI WELIKY, DAVID P · 2001 to 2021
$5.6M
Solid-State NMR of Viral Fusion Peptides and ProteinsR56AI047153 · NIAID · MICHIGAN STATE UNIVERSITY · PI David P Weliky · 2017 to 2026
$661k
SOLID STATE NMR STUDIES OF THE HIV-1 FUSION PEPTIDER21AI047153 · NIAID · MICHIGAN STATE UNIVERSITY · PI WELIKY, DAVID PAUL · 2000 to 2000
$226k
NIAID NIH HHS AI047153NIAID NIH HHS R01 AI047153NIAID NIH HHS R21 AI047153NIAID NIH HHS R56 AI047153
6 · The paper itself

Abstract

The ∼25 N-terminal "HAfp" residues of the HA2 subunit of the influenza virus hemagglutinin protein are critical for fusion between the viral and endosomal membranes at low pH. Earlier studies of HAfp in detergent support (1) N-helix/turn/C-helix structure at pH 5 with open interhelical geometry and N-helix/turn/C-coil structure at pH 7; or (2) N-helix/turn/C-helix at both pHs with closed interhelical geometry. These different structures led to very different models of HAfp membrane location and different models of catalysis of membrane fusion by HAfp. In this study, the interhelical geometry of membrane-associated HAfp is probed by solid-state NMR. The data are well-fitted to a population mixture of closed and semiclosed structures. The two structures have similar interhelical geometries and are planar with hydrophobic and hydrophilic faces. The different structures of HAfp in detergent vs membrane could be due to the differences in interaction with the curved micelle vs flat membrane with better geometric matching between the closed and semiclosed structures and the membrane. The higher fusogenicity of longer sequences and low pH is correlated with hydrophobic surface area and consequent increased membrane perturbation.

Indexed as

Amino Acid SequenceAnimalsDetergentsHemagglutinin Glycoproteins, Influenza VirusHemagglutinins, ViralHumansHydrophobic and Hydrophilic InteractionsInfluenza, HumanMicellesModels, MolecularMolecular Sequence DataNuclear Magnetic Resonance, BiomolecularOrthomyxoviridaeOrthomyxoviridae InfectionsProtein Structure, SecondaryDetergentsHemagglutinin Glycoproteins, Influenza Virushemagglutinin HA-2 fusogenic peptide, Influenza virusHemagglutinins, ViralMicelles

Identifiers

PMID26039158
PMCPMC4481145

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.