Evidence map›Paper›PMID 26038983›Full record

ArticlePrion2015

W8, a new Sup35 prion strain, transmits distinctive information with a conserved assembly scheme.

Yu-Wen Huang, Yuan-Chih Chang, Ruben Diaz-Avalos, Chih-Yen King

Abstract read
In one paragraph

Article in Prion, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Yeast Sup35 Prion Structure: Two Types, Four Parts, Many Variants.International journal of molecular sciences · 2019
    Article
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Yu-Wen Huanga Molecular and Cell Biology; Taiwan International Graduate Program; Academia Sinica and National Defense Medical Center ; Taipei , Taiwan.
Yuan-Chih Chang
Ruben Diaz-Avalos
Chih-Yen King

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Prion strains are different self-propagating conformers of the same infectious protein. Three strains of the [PSI] prion, infectious forms of the yeast Sup35 protein, have been previously characterized in our laboratory. Here we report the discovery of a new [PSI] strain, named W8. We demonstrate its robust cellular propagation as well as the protein-only transmission. To reveal strain-specific sequence requirement, mutations that interfered with the propagation of W8 were identified by consecutive substitution of residues 5-55 of Sup35 by proline and insertion of glycine at alternate sites in this segment. Interestingly, propagating W8 with single mutations at residues 5-7 and around residue 43 caused the strain to transmute. In contrast to the assertion that [PSI] existed as a dynamic cloud of sub-structures, no random drift in transmission characteristics was detected in mitotically propagated W8 populations. Electron diffraction and mass-per-length measurements indicate that, similar to the 3 previously characterized strains, W8 fibers are composed of about 1 prion molecule per 4.7-Å cross-β repeat period. Thus differently folded single Sup35 molecules, not dimeric and trimeric assemblies, form the basic repeating units to build the 4 [PSI] strains.

Indexed as

AllelesConserved SequencePeptide Termination FactorsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsPeptide Termination FactorsSaccharomyces cerevisiae ProteinsSUP35 protein, S cerevisiae5-FOA, 5-fluoroorotic acidamyloid, prion strain, [PSI+], SUP35, yeastAβ, amyloid β-proteinGFP, green fluorescent proteinmpl, mass per lengthPrP, prion proteinSC, synthetic completeSTEM, scanning transmission electron microscopyYPD, yeast extract, peptone, dextrose

Identifiers

PMID26038983
PMCPMC4601305

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.