Evidence map›Paper›PMID 26038562›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2015

Kinetically coupled folding of a single HIV-1 glycoprotein 41 complex in viral membrane fusion and inhibition.

Junyi Jiao, Aleksander A Rebane, Lu Ma, Ying Gao, Yongli Zhang

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 19 citations in OpenAlex.

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  9. Energetics, kinetics, and pathway of SNARE folding and assembly revealed by optical tweezers.Protein science : a publication of the Protein Society · 2017
    Review
  10. Sequential activation of the three protomers in the Moloney murine leukemia virus Env.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  11. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Junyi JiaoDepartment of Cell Biology, Yale University, School of Medicine, New Haven, CT 06511; Integrated Graduate Program in Physical and Engineering Biology, Yale University, New Haven, CT 06511;
Aleksander A RebaneDepartment of Cell Biology, Yale University, School of Medicine, New Haven, CT 06511; Integrated Graduate Program in Physical and Engineering Biology, Yale University, New Haven, CT 06511; Department of Physics, Yale University, New Haven, CT 06511;
Lu MaDepartment of Cell Biology, Yale University, School of Medicine, New Haven, CT 06511;
Ying GaoDepartment of Cell Biology, Yale University, School of Medicine, New Haven, CT 06511; National Center for Protein Science Shanghai, Institute of Biochemistry and Cell Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai 201210, China;
Yongli ZhangDepartment of Cell Biology, Yale University, School of Medicine, New Haven, CT 06511; Nanobiology Institute, Yale University, West Haven, CT 06477 yongli.zhang@yale.edu.
Yale University · USChinese Academy of Sciences · CN

Funding

Single-molecule manipulation of SNAREsR01GM093341 · NIGMS · YALE UNIVERSITY · PI ZHANG, YONGLI · 2010 to 2018
$3.1M
NIGMS NIH HHS GM093341NIGMS NIH HHS R01 GM093341
6 · The paper itself

Abstract

HIV-1 glycoprotein 41 (gp41) mediates viral entry into host cells by coupling its folding energy to membrane fusion. Gp41 folding is blocked by fusion inhibitors, including the commercial drug T20, to treat HIV/AIDS. However, gp41 folding intermediates, energy, and kinetics are poorly understood. Here, we identified the folding intermediates of a single gp41 trimer-of-hairpins and measured their associated energy and kinetics using high-resolution optical tweezers. We found that folding of gp41 hairpins was energetically independent but kinetically coupled: Each hairpin contributed a folding energy of ∼-23 kBT, but folding of one hairpin successively accelerated the folding rate of the next one by ∼20-fold. Membrane-mimicking micelles slowed down gp41 folding and reduced the stability of the six-helix bundle. However, the stability was restored by cooperative folding of the membrane-proximal external region. Surprisingly, T20 strongly inhibited gp41 folding by actively displacing the C-terminal hairpin strand in a force-dependent manner. The inhibition was abolished by a T20-resistant gp41 mutation. The energetics and kinetics of gp41 folding established by us provides a basis to understand viral membrane fusion, infection, and therapeutic intervention.

Indexed as

Models, MolecularVirus InternalizationAlgorithmsAmino Acid SequenceAnti-HIV AgentsCloning, MolecularEnfuvirtideHIV-1HIV Envelope Protein gp41KineticsLikelihood FunctionsMolecular Sequence DataOptical TweezersPeptide FragmentsProtein FoldingAnti-HIV AgentsEnfuvirtideHIV Envelope Protein gp41Peptide Fragmentsfusion inhibitorgp41 complexoptical tweezersprotein foldingviral fusion

Identifiers

PMID26038562
PMCPMC4460471
OpenAlexW1599046084

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.