Evidence map›Paper›PMID 26038508›Full record

ArticleEmerging microbes & infections2014

Multiple introductions of highly pathogenic avian influenza H5N1 viruses into Bangladesh.

Atanaska Marinova-Petkova, Mohammed M Feeroz, S M Rabiul Alam, M Kamrul Hasan, Sharmin Akhtar, Lisa Jones-Engel, David Walker, Laura McClenaghan, Adam Rubrum, John Franks and 6 more

Abstract read
In one paragraph

Article in Emerging microbes & infections, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed.

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  15. A Decade of Avian Influenza in Bangladesh: Where Are We Now?Tropical medicine and infectious disease · 2019
    Review
  16. Article
  17. Review
  18. Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Atanaska Marinova-PetkovaDepartment of Infectious Diseases, St. Jude Children's Research Hospital , Memphis, TN 38105, USA.
Mohammed M FeerozDepartment of Zoology, Jahangirnagar University , Dhaka-1342, Bangladesh.
S M Rabiul AlamDepartment of Zoology, Jahangirnagar University , Dhaka-1342, Bangladesh.
M Kamrul HasanDepartment of Zoology, Jahangirnagar University , Dhaka-1342, Bangladesh.
Sharmin AkhtarDepartment of Zoology, Jahangirnagar University , Dhaka-1342, Bangladesh.
Lisa Jones-EngelNational Primate Research Center, University of Washington , Seattle, WA 98195, USA.
David WalkerDepartment of Infectious Diseases, St. Jude Children's Research Hospital , Memphis, TN 38105, USA.
Laura McClenaghanDepartment of Infectious Diseases, St. Jude Children's Research Hospital , Memphis, TN 38105, USA.
Adam RubrumDepartment of Infectious Diseases, St. Jude Children's Research Hospital , Memphis, TN 38105, USA.
John FranksDepartment of Infectious Diseases, St. Jude Children's Research Hospital , Memphis, TN 38105, USA.
Patrick SeilerDepartment of Infectious Diseases, St. Jude Children's Research Hospital , Memphis, TN 38105, USA.
Trushar JeevanDepartment of Infectious Diseases, St. Jude Children's Research Hospital , Memphis, TN 38105, USA.
Pamela McKenzieDepartment of Infectious Diseases, St. Jude Children's Research Hospital , Memphis, TN 38105, USA.
Scott KraussDepartment of Infectious Diseases, St. Jude Children's Research Hospital , Memphis, TN 38105, USA.
Richard J WebbyDepartment of Infectious Diseases, St. Jude Children's Research Hospital , Memphis, TN 38105, USA.
Robert G WebsterDepartment of Infectious Diseases, St. Jude Children's Research Hospital , Memphis, TN 38105, USA.

Funding

Washington National Primate Research CenterP51OD010425 · OD · UNIVERSITY OF WASHINGTON · PI Mari Ostendorf · 2012 to 2026
$201.8M
NIAID NIH HHS HHSN272200900007CNIH HHS P51 OD010425
6 · The paper itself

Abstract

Highly pathogenic H5N1 and low pathogenic H9N2 influenza viruses are endemic to poultry markets in Bangladesh and have cocirculated since 2008. H9N2 influenza viruses circulated constantly in the poultry markets, whereas highly pathogenic H5N1 viruses occurred sporadically, with peaks of activity in cooler months. Thirty highly pathogenic H5N1 influenza viruses isolated from poultry were characterized by antigenic, molecular, and phylogenetic analyses. Highly pathogenic H5N1 influenza viruses from clades 2.2.2 and 2.3.2.1 were isolated from live bird markets only. Phylogenetic analysis of the 30 H5N1 isolates revealed multiple introductions of H5N1 influenza viruses in Bangladesh. There was no reassortment between the local H9N2 influenza viruses and H5N1 genotype, despite their prolonged cocirculation. However, we detected two reassortant H5N1 viruses, carrying the M gene from the Chinese H9N2 lineage, which briefly circulated in the Bangladesh poultry markets and then disappeared. On the other hand, interclade reassortment occurred within H5N1 lineages and played a role in the genesis of the currently dominant H5N1 viruses in Bangladesh. Few 'human-like' mutations in H5N1 may account for the limited number of human cases. Antigenically, clade 2.3.2.1 H5N1 viruses in Bangladesh have evolved since their introduction and are currently mainly homogenous, and show evidence of recent antigenic drift. Although reassortants containing H9N2 genes were detected in live poultry markets in Bangladesh, these reassortants failed to supplant the dominant H5N1 lineage.

Indexed as

BangladeshcladesH5N1H9N2live bird marketsphylogenetic treereassortment

Identifiers

PMID26038508
PMCPMC3944120

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.