Evidence map›Paper›PMID 26038496›Full record

ArticleEmerging microbes & infections2014

Burkholderia pseudomallei in soil samples from an oceanarium in Hong Kong detected using a sensitive PCR assay.

Susanna Kp Lau, San-Yuen Chan, Shirly Ot Curreem, Suk-Wai Hui, Candy Cy Lau, Paul Lee, Chi-Chun Ho, Paolo Martelli, Patrick Cy Woo

Open access · goldAbstract read
In one paragraph

Article in Emerging microbes & infections, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 20 citations in OpenAlex.

  1. Probable airborne transmission ofEmerging microbes & infections · 2023
    Article
  2. Article
  3. Genome-wide transposon mutagenesis analysis ofFrontiers in cellular and infection microbiology · 2022
    Article
  4. Article
  5. Article
  6. Article
  7. Melioidosis in Hong Kong.Tropical medicine and infectious disease · 2018
    Review
  8. Antimicrobial agents and chemotherapy · 2018
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Laboratory diagnosis of melioidosis: past, present and future.Experimental biology and medicine (Maywood, N.J.) · 2015
    Review
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Susanna Kp LauDepartment of Microbiology, The University of Hong Kong , Hong Kong, China ; Research Centre of Infection and Immunology, The University of Hong Kong , Hong Kong, China ; State Key Laboratory of Emerging Infectious Diseases, The University of Hong Kong , Hong Kong, China ; Carol Yu Center for Infection, The University of Hong Kong , Hong Kong, China.
San-Yuen ChanOcean Park Corporation, Hong Kong, China.
Shirly Ot CurreemDepartment of Microbiology, The University of Hong Kong , Hong Kong, China.
Suk-Wai HuiOcean Park Corporation, Hong Kong, China.
Candy Cy LauDepartment of Microbiology, The University of Hong Kong , Hong Kong, China.
Paul LeeOcean Park Corporation, Hong Kong, China.
Chi-Chun HoDepartment of Microbiology, The University of Hong Kong , Hong Kong, China.
Paolo MartelliOcean Park Corporation, Hong Kong, China.
Patrick Cy WooDepartment of Microbiology, The University of Hong Kong , Hong Kong, China ; Research Centre of Infection and Immunology, The University of Hong Kong , Hong Kong, China ; State Key Laboratory of Emerging Infectious Diseases, The University of Hong Kong , Hong Kong, China ; Carol Yu Center for Infection, The University of Hong Kong , Hong Kong, China.
University of Hong Kong · HK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Melioidosis, caused by Burkholderia pseudomallei, is an emerging infectious disease with an expanding geographical distribution. Although assessment of the environmental load of B. pseudomallei is important for risk assessment in humans or animals in endemic areas, traditional methods of bacterial culture for isolation have low sensitivities and are labor-intensive. Using a specific polymerase chain reaction (PCR) assay targeting a Tat domain protein in comparison with a bacterial culture method, we examined the prevalence of B. pseudomallei in soil samples from an oceanarium in Hong Kong where captive marine mammals and birds have contracted melioidosis. Among 1420 soil samples collected from various sites in the oceanarium over a 15-month period, B. pseudomallei was detected in nine (0.6%) soil samples using bacterial culture, whereas it was detected in 96 (6.8%) soil samples using the specific PCR assay confirmed by sequencing. The PCR-positive samples were detected during various months, with higher detection rates observed during summer months. Positive PCR detection was significantly correlated with ambient temperature (P<0.0001) and relative humidity (P=0.011) but not with daily rainfall (P=0.241) or a recent typhoon (P=0.787). PCR-positive samples were obtained from all sampling locations, with the highest detection rate in the valley. Our results suggest that B. pseudomallei is prevalent and endemic in the oceanarium. The present PCR assay is more sensitive than the bacterial culture method, and it may be used to help better assess the transmission of melioidosis and to design infection control measures for captive animals in this unique and understudied environment.

Indexed as

Burkholderia pseudomalleiculturemelioidosisoceanariumPCRsoil

Identifiers

PMID26038496
PMCPMC4217092
OpenAlexW2049546579

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.