Evidence map›Paper›PMID 26037924›Full record

ArticleThe Journal of biological chemistry2015

The Non-canonical Tetratricopeptide Repeat (TPR) Domain of Fluorescent (FLU) Mediates Complex Formation with Glutamyl-tRNA Reductase.

Min Zhang, Feilong Zhang, Ying Fang, Xuemin Chen, Yuhong Chen, Wenxia Zhang, Huai-En Dai, Rongcheng Lin, Lin Liu

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 37 citations in OpenAlex.

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  7. An alanine to valine mutation of glutamyl-tRNA reductase enhances 5-aminolevulinic acid synthesis in rice.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022
    Article
  8. Article
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  12. Identification and Functional Analysis of TomatoInternational journal of molecular sciences · 2021
    Article
  13. Review
  14. Review
  15. Article
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  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Min ZhangFrom the School of Life Sciences, Anhui University, Hefei, Anhui 230601.
Feilong ZhangFrom the School of Life Sciences, Anhui University, Hefei, Anhui 230601.
Ying Fangthe Photosynthesis Research Center, Key Laboratory of Photobiology, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China, and the University of Chinese Academy of Sciences, Beijing 100049, China.
Xuemin Chenthe Photosynthesis Research Center, Key Laboratory of Photobiology, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China, and the University of Chinese Academy of Sciences, Beijing 100049, China.
Yuhong Chenthe Photosynthesis Research Center, Key Laboratory of Photobiology, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China, and.
Wenxia Zhangthe Photosynthesis Research Center, Key Laboratory of Photobiology, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China, and.
Huai-En Daithe Photosynthesis Research Center, Key Laboratory of Photobiology, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China, and.
Rongcheng Linthe Photosynthesis Research Center, Key Laboratory of Photobiology, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China, and.
Lin Liuthe Photosynthesis Research Center, Key Laboratory of Photobiology, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China, and liulin@ibcas.ac.cn.
Chinese Academy of Sciences · CNAnhui University · CNInstitute of Botany · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The tetratricopeptide repeat (TPR)-containing protein FLU is a negative regulator of chlorophyll biosynthesis in plants. It directly interacts through its TPR domain with glutamyl-tRNA reductase (GluTR), the rate-limiting enzyme in the formation of δ-aminolevulinic acid (ALA). Delineation of how FLU binds to GluTR is important for understanding the molecular basis for FLU-mediated repression of synthesis of ALA, the universal tetrapyrrole precursor. Here, we characterize the FLU-GluTR interaction by solving the crystal structures of the uncomplexed TPR domain of FLU (FLU(TPR)) at 1.45-Å resolution and the complex of the dimeric domain of GluTR bound to FLU(TPR) at 2.4-Å resolution. Three non-canonical TPR motifs of each FLU(TPR) form a concave surface and clamp the helix bundle in the C-terminal dimeric domain of GluTR. We demonstrate that a 2:2 FLU(TPR)-GluTR complex is the functional unit for FLU-mediated GluTR regulation and suggest that the formation of the FLU-GluTR complex prevents glutamyl-tRNA, the GluTR substrate, from binding with this enzyme. These results also provide insights into the spatial regulation of ALA synthesis by the membrane-located FLU protein.

Indexed as

Aldehyde OxidoreductasesAmino Acid SequenceAminolevulinic AcidArabidopsisArabidopsis ProteinsCrystallography, X-RayKineticsModels, MolecularMolecular Sequence DataMultiprotein ComplexesProtein Interaction Domains and MotifsProtein Structure, QuaternaryRepetitive Sequences, Amino AcidSequence Homology, Amino AcidTetrapyrrolesAldehyde OxidoreductasesAminolevulinic AcidArabidopsis ProteinsFLU protein, Arabidopsisglutamyl tRNA reductaseMultiprotein ComplexesTetrapyrrolesArabidopsis thalianabiosynthesischlorophyllchlorophyll biosynthesiscrystal structureFluorescent (FLU)protein-protein interactiontetratricopeptide repeat (TPR)

Identifiers

PMID26037924
PMCPMC4498089
OpenAlexW1489467437

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.