Evidence map›Paper›PMID 26037053›Full record

ArticleNeuroImage2015

4D MEMRI atlas of neonatal FVB/N mouse brain development.

Kamila U Szulc, Jason P Lerch, Brian J Nieman, Benjamin B Bartelle, Miriam Friedel, Giselle A Suero-Abreu, Charles Watson, Alexandra L Joyner, Daniel H Turnbull

Open access · greenAbstract read
In one paragraph

Article in NeuroImage, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
9.2field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 79 citations in OpenAlex.

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  12. Developmental Mouse Brain Common Coordinate Framework.bioRxiv : the preprint server for biology · 2023
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  18. Fetal programming of human energy homeostasis brain networks: Issues and considerations.Obesity reviews : an official journal of the International Association for the Study of Obesity · 2022
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 3 countries.

Kamila U SzulcSkirball Institute of Biomolecular Medicine, New York University School of Medicine, New York, NY, USA; Biomedical Imaging, New York University School of Medicine, New York, NY, USA.
Jason P LerchMouse Imaging Centre, Hospital for Sick Children, Toronto, ON, Canada; Department of Medical Biophysics, University of Toronto, Toronto, ON, Canada.
Brian J NiemanMouse Imaging Centre, Hospital for Sick Children, Toronto, ON, Canada; Department of Medical Biophysics, University of Toronto, Toronto, ON, Canada; Ontario Institute for Cancer Research, Toronto, ON, Canada.
Benjamin B BartelleSkirball Institute of Biomolecular Medicine, New York University School of Medicine, New York, NY, USA; Molecular Biophysics Graduate Programs, New York University School of Medicine, New York, NY, USA.
Miriam FriedelMouse Imaging Centre, Hospital for Sick Children, Toronto, ON, Canada.
Giselle A Suero-AbreuSkirball Institute of Biomolecular Medicine, New York University School of Medicine, New York, NY, USA; Biomedical Imaging, New York University School of Medicine, New York, NY, USA.
Charles WatsonHealth Sciences, Curtin University, Perth, Western Australia, Australia.
Alexandra L JoynerDevelopmental Biology Program, Sloan-Kettering Institute, New York, NY, USA.
Daniel H TurnbullSkirball Institute of Biomolecular Medicine, New York University School of Medicine, New York, NY, USA; Biomedical Imaging, New York University School of Medicine, New York, NY, USA; Molecular Biophysics Graduate Programs, New York University School of Medicine, New York, NY, USA; Department of Radiology, New York University School of Medicine, New York, NY, USA; Department of Pathology, New York University School of Medicine, New York, NY, USA. Electronic address: daniel.turnbull@med.nyu.edu.
New York University · USUniversity of Toronto · CACurtin University · AUHospital for Sick Children · CAKettering University · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Hongbiao Carl Lekaye · 1985 to 2026
$347.4M
Vaccine FacilityP30CA016087 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI ANIRBAN MAITRA · 1985 to 2026
$83.1M
Engrailed genes and cerebellum morphology, spatial gene expression and circuitryR37MH085726 · NIMH · SLOAN-KETTERING INST CAN RESEARCH · PI JOYNER, ALEXANDRA L. · 2014 to 2023
$6.7M
Ultrasound and MR Imaging of Mouse Brain Development.R01NS038461 · NINDS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI TURNBULL, DANIEL H · 1999 to 2016
$6.5M
Training program in Molecular BiophysicsT32GM088118 · NIGMS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI STOKES, DAVID L. · 2010 to 2019
$1.8M
NCI NIH HHS P30 CA008748NCI NIH HHS P30 CA016087NCI NIH HHS P30CA016087NIGMS NIH HHS T32 GM088118NIMH NIH HHS R37 MH085726NIMH NIH HHS R37MH085726NINDS NIH HHS R01 NS038461NINDS NIH HHS R01NS038461
6 · The paper itself

Abstract

The widespread use of the mouse as a model system to study brain development has created the need for noninvasive neuroimaging methods that can be applied to early postnatal mice. The goal of this study was to optimize in vivo three- (3D) and four-dimensional (4D) manganese (Mn)-enhanced MRI (MEMRI) approaches for acquiring and analyzing data from the developing mouse brain. The combination of custom, stage-dependent holders and self-gated (motion-correcting) 3D MRI sequences enabled the acquisition of high-resolution (100-μm isotropic), motion artifact-free brain images with a high level of contrast due to Mn-enhancement of numerous brain regions and nuclei. We acquired high-quality longitudinal brain images from two groups of FVB/N strain mice, six mice per group, each mouse imaged on alternate odd or even days (6 3D MEMRI images at each day) covering the developmental stages between postnatal days 1 to 11. The effects of Mn-exposure, anesthesia and MRI were assessed, showing small but significant transient effects on body weight and brain volume, which recovered with time and did not result in significant morphological differences when compared to controls. Metrics derived from deformation-based morphometry (DBM) were used for quantitative analysis of changes in volume and position of a number of brain regions. The cerebellum, a brain region undergoing significant changes in size and patterning at early postnatal stages, was analyzed in detail to demonstrate the spatiotemporal characterization made possible by this new atlas of mouse brain development. These results show that MEMRI is a powerful tool for quantitative analysis of mouse brain development, with great potential for in vivo phenotype analysis in mouse models of neurodevelopmental diseases.

Indexed as

Contrast MediaManganeseAnimalsAnimals, NewbornAtlases as TopicBrainImage EnhancementImaging, Three-DimensionalMagnetic Resonance ImagingMiceTime FactorsContrast MediaManganeseBrain nucleiCerebellumImage registrationMn-enhanced MRI

Identifiers

PMID26037053
PMCPMC4554969
OpenAlexW759650844

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.