Evidence map›Paper›PMID 26036351›Full record

ArticlePediatric cardiology2015

Identification of Copy Number Variations in Isolated Tetralogy of Fallot.

Adolfo Aguayo-Gómez, Jazmín Arteaga-Vázquez, Yevgeniya Svyryd, Juan Calderón-Colmenero, Carlos Zamora-González, Gilberto Vargas-Alarcón, Osvaldo M Mutchinick

Abstract read
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In one paragraph

Article in Pediatric cardiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
0.6field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Journal of pediatric genetics · 2021
    Article
  8. Article
  9. Article
  10. The Functional Polymorphism R129W in theGenetic testing and molecular biomarkers · 2019
    Article
  11. CHD4 and the NuRD complex directly control cardiac sarcomere formation.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  12. Article
  13. Review
  14. Embryonic Development of the Bicuspid Aortic Valve.Journal of cardiovascular development and disease · 2015
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Adolfo Aguayo-GómezDepartment of Genetics, Instituto Nacional de Ciencias Médicas y Nutrición "Salvador Zubirán", Mexico, D.F., Mexico.
Jazmín Arteaga-VázquezDepartment of Genetics, Instituto Nacional de Ciencias Médicas y Nutrición "Salvador Zubirán", Mexico, D.F., Mexico. jazminarteaga@hotmail.com.
Yevgeniya SvyrydDepartment of Genetics, Instituto Nacional de Ciencias Médicas y Nutrición "Salvador Zubirán", Mexico, D.F., Mexico.
Juan Calderón-ColmeneroDepartment of Pediatric Cardiology, Instituto Nacional de Cardiología Ignacio Chávez, Mexico, D.F., Mexico.
Carlos Zamora-GonzálezCongenital Heart Defects Adults Clinic, Instituto Nacional de Cardiología Ignacio Chávez, Mexico, D.F., Mexico.
Gilberto Vargas-AlarcónDepartment of Molecular Biology, Instituto Nacional de Cardiología Ignacio Chávez, Mexico, D.F., Mexico.
Osvaldo M MutchinickDepartment of Genetics, Instituto Nacional de Ciencias Médicas y Nutrición "Salvador Zubirán", Mexico, D.F., Mexico. osvaldo@unam.mx.
Instituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán · MXInstituto Nacional de Cardiología · MX

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Tetralogy of Fallot (ToF) is one of the most common and severe congenital heart defects (CHD). Recently, unbalanced structural genomic variants or copy number variations (CNVs) were proposed to be involved in the etiology of many complex diseases, including CHDs. The aim of this study was to investigate the frequency of CNVs in a region with a high density of CNVs, 22q11.2, and other regions with CHD-related genes in a sample of 52 Mexican mestizo patients with isolated ToF and negative fluorescence in situ hybridization staining for 22q11. CNVs were studied using two multiplex ligation-dependent probe amplification (MLPA) kits, SALSA P250-B1® (DiGeorge gene region) and SALSA MLPA P311-A1® CHD-related gene regions (GATA4, NKX2-5, TBX5, BMP4, and CRELD1). The MLPA assay detected a de novo CNV deletion of the probes located in exons 2 and 7 of the TBX1 gene in one of the 52 patients studied; this result was confirmed by real-time quantitative polymerase chain reaction. This deletion was not present in the patient's parents and 104 chromosomes from healthy control subjects. Our results clearly suggest a possible etiologic association between the TBX1 deletion and the ToF in our patient.

Indexed as

DNA Copy Number VariationsAdolescentAdultExonsFemaleHumansIn Situ Hybridization, FluorescenceMaleMexicoMultiplex Polymerase Chain ReactionSequence DeletionT-Box Domain ProteinsTetralogy of FallotYoung AdultT-Box Domain ProteinsTBX1 protein, humanDNA copy number variationsTBX1 geneTetralogy of Fallot

Identifiers

PMID26036351
OpenAlexW2113721993

What OpenQuestion holds

Textmetadata
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.