Evidence map›Paper›PMID 26036284›Full record

SynthesisAlcoholism, clinical and experimental research2015

Genomewide Association Study for Maximum Number of Alcoholic Drinks in European Americans and African Americans.

Ke Xu, Henry R Kranzler, Richard Sherva, Carolyn E Sartor, Laura Almasy, Ryan Koesterer, Hongyu Zhao, Lindsay A Farrer, Joel Gelernter

Open access · greenAbstract readMeta-Analysis
In one paragraph

Synthesis in Alcoholism, clinical and experimental research, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed, 2 pooled it
5.5field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 2 syntheses or guidelines pooled it, 65 citations in OpenAlex.

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  19. The Landscape of Micro-Inversions Provide Clues for Population Genetic Analysis of Humans.Interdisciplinary sciences, computational life sciences · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 6 institutions in 1 country.

Ke XuDepartment of Psychiatry, Yale School of Medicine, and VA CT Healthcare Center, West Haven, Connecticut.
Henry R KranzlerDepartment of Psychiatry, University of Pennsylvania Perelman School of Medicine and VISN 4 MIRECC, Philadelphia VA Medical Center, Philadelphia, Pennsylvania.
Richard ShervaDepartment of Medicine (Biomedical Genetics), Boston University School of Medicine, Boston, Massachusetts.
Carolyn E SartorDepartment of Psychiatry, Yale School of Medicine, and VA CT Healthcare Center, West Haven, Connecticut.
Laura AlmasyDepartment of Psychiatry, Texas Biomedical Research Institute, San Antonio, Texas.
Ryan KoestererDepartment of Medicine (Biomedical Genetics), Boston University School of Medicine, Boston, Massachusetts.
Hongyu ZhaoDepartment of Biostatistics, Yale School of Public Health, New Haven, Connecticut.
Lindsay A FarrerDepartment of Medicine (Biomedical Genetics), Boston University School of Medicine, Boston, Massachusetts.
Joel GelernterDepartment of Psychiatry, Yale School of Medicine, and VA CT Healthcare Center, West Haven, Connecticut.
Boston University · USYale University · USConnecticut Health Foundation · USTexas Biomedical Research Institute · USVA Connecticut Healthcare System · USVA Healthcare-VISN 4 · US

Funding

Subject CollectionU10AA008401 · NIAAA · SUNY DOWNSTATE MEDICAL CENTER · PI JAY Arnold TISCHFIELD · 1989 to 2026
$162.7M
JH/CIDR Genotyping for Genome-Wide Association StudiesU01HG004438 · NHGRI · JOHNS HOPKINS UNIVERSITY · PI VALLE, DAVID · 2007 to 2011
$24.2M
SUBSTANCE ABUSEK12DA000167 · NIDA · YALE UNIVERSITY · PI STEPHANIE S O'MALLEY, Marc N Potenza · 1991 to 2026
$17.7M
The Collaborative Genetic Study of Nicotine DependenceP01CA089392 · NCI · WASHINGTON UNIVERSITY · PI RICE, JOHN P · 2001 to 2012
$17.3M
Sex-specific analysis of opioid dependence GWAS and beyondR01DA012690 · NIDA · YALE UNIVERSITY · PI GELERNTER, JOEL · 2000 to 2017
$14.0M
GENETICS OF COCAINE DEPENDENCER01DA012849 · NIDA · YALE UNIVERSITY · PI GELERNTER, JOEL · 1999 to 2010
$11.5M
Genome Wide Association Coordinating CenterU01HG004446 · NHGRI · UNIVERSITY OF WASHINGTON · PI WEIR, BRUCE S. · 2007 to 2011
$6.6M
Linkage Disequilibrium Studies of Alcohol DependenceR01AA011330 · NIAAA · YALE UNIVERSITY · PI GELERNTER, JOEL · 1997 to 2013
$6.4M
Genomewide Association Study of Cocaine Dependence in two PopulationsRC2DA028909 · NIDA · YALE UNIVERSITY · PI GELERNTER, JOEL · 2009 to 2010
$4.2M
Genetics of Cocaine DependenceR01DA018432 · NIDA · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI KRANZLER, HENRY RICHARD · 2006 to 2010
$3.5M
Genetics of Alcohol Dependence in African-AmericansR01AA017535 · NIAAA · YALE UNIVERSITY · PI GELERNTER, JOEL · 2009 to 2013
$3.0M
FAMILY STUDY OF COCAINE DEPENDENCER01DA013423 · NIDA · WASHINGTON UNIVERSITY · PI BIERUT, LAURA JEAN · 2000 to 2004
$2.2M
NCI NIH HHS P01 CA 089392NCI NIH HHS P01 CA089392NHGRI NIH HHS HHSN268200782096CNHGRI NIH HHS N01 HG065403NHGRI NIH HHS N01 HG 65403NHGRI NIH HHS U01 HG 004422NHGRI NIH HHS U01 HG004422NHGRI NIH HHS U01 HG 004438NHGRI NIH HHS U01 HG004438NHGRI NIH HHS U01 HG 004446NHGRI NIH HHS U01 HG004446NIAAA NIH HHS K08 AA017921NIAAA NIH HHS R01 AA011330NIAAA NIH HHS R01 AA017535NIAAA NIH HHS U10 AA 008401NIAAA NIH HHS U10 AA008401NIDA NIH HHS K12 DA000167NIDA NIH HHS R01 DA012690NIDA NIH HHS R01 DA012849NIDA NIH HHS R01 DA 013423NIDA NIH HHS R01 DA013423NIDA NIH HHS R01 DA018432NIDA NIH HHS RC2 DA028909
6 · The paper itself

Abstract

backgroundWe conducted a genomewide association study (GWAS) for maximum number of alcoholic drinks consumed in a 24-hour period ("MaxDrinks"), in 2 independent samples comprised of over 9,500 subjects, following up on our GWAS for alcohol dependence (AD) in European Americans (EAs) and African Americans (AAs).

methodsThe samples included our GWAS samples (Yale-UPenn) recruited for studies of the genetics of drug or AD, and a publicly available sample: the Study of Addiction: Genetics and Environment (SAGE). Genomewide association analysis was performed for ~890,000 single nucleotide polymorphisms (SNPs) using linear association random effects models. EAs and AAs were separately analyzed.

resultsThe results confirmed significant associations of the well-known functional loci at ADH1B with MaxDrinks in EAs (rs1229984 Arg48His p = 5.96 × 10(-15) ) and AAs (rs2066702 Arg370Cys, p = 2.50 × 10(-10) ). The region of significant association on chromosome 4 was extended to LOC100507053 in AAs but not EAs. We also identified potentially novel significant common SNPs for MaxDrinks in EAs in the Yale-UPenn sample: rs1799876 at SERPINC1 on chromosome 1 (4.00 × 10(-8) ) and rs2309169 close to ANKRD36 on chromosome 2 (p = 5.58 × 10(-9) ). After adjusting for the peak SNP rs1229984 on ADH1B, rs1799876 was nearly significant (p = 1.99 × 10(-7) ) and rs2309169 remained highly significant (2.12 × 10(-9) ).

conclusionsThe results provide further support that ADH1B modulates alcohol consumption. Future replications of potential novel loci are warranted. This is the largest MaxDrinks GWAS to date, the first in AAs.

Indexed as

Genome-Wide Association StudyAlcohol DehydrogenaseAlcohol DrinkingBlack or African AmericanHumansWhite PeopleADH1B protein, humanAlcohol DehydrogenaseAfrican AmericanAlcohol Maximum DrinksEuropean AmericanGenomewide Association

Identifiers

PMID26036284
PMCPMC4706077
OpenAlexW2168196932

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.