Evidence map›Paper›PMID 26035178›Full record

ArticlePloS one2015

Regulation of Nav1.7: A Conserved SCN9A Natural Antisense Transcript Expressed in Dorsal Root Ganglia.

Jennifer Koenig, Robert Werdehausen, John E Linley, Abdella M Habib, Jeffrey Vernon, Stephane Lolignier, Niels Eijkelkamp, Jing Zhao, Andrei L Okorokov, C Geoffrey Woods and 2 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed, 1 pooled it
1.8field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 1 synthesis or guideline pooled it, 38 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Article
  6. Rbfox1 regulates alternative splicing of Nrcam in primary sensory neurons to mediate peripheral nerve injury-induced neuropathic pain.Neurotherapeutics : the journal of the American Society for Experimental NeuroTherapeutics · 2024
    Article
  7. Article
  8. Ion channel long non-coding RNAs in neuropathic pain.Pflugers Archiv : European journal of physiology · 2022
    Review
  9. Review
  10. Article
  11. Article
  12. Mining the NaBiochemical pharmacology · 2019
    Review
  13. Article
  14. Long noncoding RNA (lncRNA): a target in neuropathic pain.Expert opinion on therapeutic targets · 2019
    Review
  15. Article
  16. The NaFrontiers in pharmacology · 2018
    Review
  17. Cannabis and Pain: A Clinical Review.Cannabis and cannabinoid research · 2017
    Review
  18. Review
  19. Article
  20. Cannabis and pain: a scoping review.Brazilian journal of anesthesiology (Elsevier)
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 4 countries.

Jennifer KoenigMolecular Nociception Group, Wolfson Institute for Biomedical Research, University College London, Gower Street, London, United Kingdom.
Robert WerdehausenMolecular Nociception Group, Wolfson Institute for Biomedical Research, University College London, Gower Street, London, United Kingdom; Department of Anesthesiology, Medical Faculty, Heinrich-Heine-University Düsseldorf, Moorenstr. 5, Düsseldorf, Germany.
John E LinleyMolecular Nociception Group, Wolfson Institute for Biomedical Research, University College London, Gower Street, London, United Kingdom.
Abdella M HabibMolecular Nociception Group, Wolfson Institute for Biomedical Research, University College London, Gower Street, London, United Kingdom.
Jeffrey VernonMolecular Nociception Group, Wolfson Institute for Biomedical Research, University College London, Gower Street, London, United Kingdom.
Stephane LolignierMolecular Nociception Group, Wolfson Institute for Biomedical Research, University College London, Gower Street, London, United Kingdom.
Niels EijkelkampMolecular Nociception Group, Wolfson Institute for Biomedical Research, University College London, Gower Street, London, United Kingdom; Laboratory for Translational Immunology, UMC Utrecht, Utrecht, The Netherlands.
Jing ZhaoMolecular Nociception Group, Wolfson Institute for Biomedical Research, University College London, Gower Street, London, United Kingdom.
Andrei L OkorokovWolfson Institute for Biomedical Research, University College London, Gower street, London, United Kingdom.
C Geoffrey WoodsCambridge Institute for Medical Research, University of Cambridge, Hills Road, Cambridge, United Kingdom.
John N WoodMolecular Nociception Group, Wolfson Institute for Biomedical Research, University College London, Gower Street, London, United Kingdom; Department of Molecular Medicine and Biopharmaceutical Sciences, Graduate School of Convergence Science and Technology, College of Medicine, Seoul National University, Seoul, South Korea.
James J CoxMolecular Nociception Group, Wolfson Institute for Biomedical Research, University College London, Gower Street, London, United Kingdom.
University College London · GBCenter for Translational Molecular Medicine · NLHeinrich Heine University Düsseldorf · DEInstitute for Medical Research · MY

Funding

Arthritis Research UKBiotechnology and Biological Sciences Research Council BB/F000227/1Medical Research Council G0901905Medical Research Council G1100340Medical Research Council MR/J012742/1Wellcome Trust 101054
6 · The paper itself

Abstract

The Nav1.7 voltage-gated sodium channel, encoded by SCN9A, is critical for human pain perception yet the transcriptional and post-transcriptional mechanisms that regulate this gene are still incompletely understood. Here, we describe a novel natural antisense transcript (NAT) for SCN9A that is conserved in humans and mice. The NAT has a similar tissue expression pattern to the sense gene and is alternatively spliced within dorsal root ganglia. The human and mouse NATs exist in cis with the sense gene in a tail-to-tail orientation and both share sequences that are complementary to the terminal exon of SCN9A/Scn9a. Overexpression analyses of the human NAT in human embryonic kidney (HEK293A) and human neuroblastoma (SH-SY5Y) cell lines show that it can function to downregulate Nav1.7 mRNA, protein levels and currents. The NAT may play an important role in regulating human pain thresholds and is a potential candidate gene for individuals with chronic pain disorders that map to the SCN9A locus, such as Inherited Primary Erythromelalgia, Paroxysmal Extreme Pain Disorder and Painful Small Fibre Neuropathy, but who do not contain mutations in the sense gene. Our results strongly suggest the SCN9A NAT as a prime candidate for new therapies based upon augmentation of existing antisense RNAs in the treatment of chronic pain conditions in man.

Indexed as

AnimalsCloning, MolecularComputer SimulationConserved SequenceGanglia, SpinalGene Expression RegulationHEK293 CellsHumansMiceNAV1.7 Voltage-Gated Sodium ChannelPainRNA, AntisenseRNA, MessengerNAV1.7 Voltage-Gated Sodium ChannelRNA, AntisenseRNA, MessengerSCN9A protein, humanScn9a protein, mouse

Identifiers

PMID26035178
PMCPMC4452699
OpenAlexW1527748034

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.