Evidence map›Paper›PMID 26035058›Full record

ArticleTranslational psychiatry2015

Genome-wide copy-number variation study of psychosis in Alzheimer's disease.

X Zheng, F Y Demirci, M M Barmada, G A Richardson, O L Lopez, R A Sweet, M I Kamboh, E Feingold

Open access · goldAbstract read
In one paragraph

Article in Translational psychiatry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed, 1 pooled it
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 1 synthesis or guideline pooled it, 28 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. A brain DNA co-methylation network analysis of psychosis in Alzheimer's disease.Alzheimer's & dementia : the journal of the Alzheimer's Association · 2025
    Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Psychosis in Alzheimer's Disease.Current neurology and neuroscience reports · 2020
    Review
  10. Review
  11. Article
  12. Article
  13. Genetic Variations and Precision Medicine.Perspectives in health information managemen · 2019
    Review
  14. Review
  15. Article
  16. Genetics of psychosis of Alzheimer disease.American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics · 2017
    Review
  17. Review
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

X Zheng1] Department of Biostatistics, Graduate School of Public Health, University of Pittsburgh, Pittsburgh, PA, USA [2] Department of Pediatrics, School of Medicine, University of North Carolina, Chapel Hill, NC, USA.
F Y DemirciDepartment of Human Genetics, Graduate School of Public Health, University of Pittsburgh, Pittsburgh, PA, USA.
M M BarmadaDepartment of Human Genetics, Graduate School of Public Health, University of Pittsburgh, Pittsburgh, PA, USA.
G A Richardson1] Department of Psychiatry, School of Medicine, University of Pittsburgh, Pittsburgh, PA, USA [2] Department of Epidemiology, Graduate School of Public Health, University of Pittsburgh, Pittsburgh, PA, USA.
O L Lopez1] Department of Neurology, School of Medicine, University of Pittsburgh, Pittsburgh, PA, USA [2] VISN 4 Mental Illness Research, Education and Clinical Center, VA Pittsburgh Healthcare System, Pittsburgh, PA, USA.
R A Sweet1] Department of Psychiatry, School of Medicine, University of Pittsburgh, Pittsburgh, PA, USA [2] Department of Neurology, School of Medicine, University of Pittsburgh, Pittsburgh, PA, USA [3] VISN 4 Mental Illness Research, Education and Clinical Center, VA Pittsburgh Healthcare System, Pittsburgh, PA, USA.
M I Kamboh1] Department of Human Genetics, Graduate School of Public Health, University of Pittsburgh, Pittsburgh, PA, USA [2] Department of Psychiatry, School of Medicine, University of Pittsburgh, Pittsburgh, PA, USA [3] Department of Epidemiology, Graduate School of Public Health, University of Pittsburgh, Pittsburgh, PA, USA.
E Feingold1] Department of Biostatistics, Graduate School of Public Health, University of Pittsburgh, Pittsburgh, PA, USA [2] Department of Human Genetics, Graduate School of Public Health, University of Pittsburgh, Pittsburgh, PA, USA.
University of Pittsburgh · US

Funding

TREATMENT OF DEPRESSION IN ALZHEIMER'S DISEASEP50AG005133 · NIA · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI BECKER, JAMES T. · 1985 to 2019
$43.0M
Prediction of Psychosis in Alzheimer DiseaseR01AG027224 · NIA · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI SWEET, ROBERT A · 2007 to 2021
$10.8M
Search for the Alzheimers GenesR01AG030653 · NIA · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI KAMBOH, M. ILYAS · 2009 to 2019
$7.7M
Deep Resequencing of Candidate Gene Regions in Late-onset Alzheimer's DiseaseR01AG041718 · NIA · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI KAMBOH, M. ILYAS · 2012 to 2016
$3.0M
PSYCHIATRIC EPIDEMIOLOGY TRAINING PROGRAMT32MH015169 · NIMH · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI RICHARDSON, GALE A. · 1985 to 2011
$1.8M
NIA NIH HHS AG005133NIA NIH HHS AG027224NIA NIH HHS AG030653NIA NIH HHS AG041718NIA NIH HHS P50 AG005133NIA NIH HHS R01 AG027224NIA NIH HHS R01 AG030653NIA NIH HHS R01 AG041718NIMH NIH HHS T32 MH015169
6 · The paper itself

Abstract

About 40-60% of patients with late-onset Alzheimer's disease (AD) develop psychosis, which represents a distinct phenotype of more severe cognitive and functional deficits. The estimated heritability of AD+P is ~61%, which makes it a good target for genetic mapping. We performed a genome-wide copy-number variation (CNV) study on 496 AD cases with psychosis (AD+P), 639 AD subjects with intermediate psychosis (AD intermediate P) and 156 AD subjects without psychosis (AD-P) who were recruited at the University of Pittsburgh Alzheimer's Disease Research Center using over 1 million single-nucleotide polymorphisms (SNPs) and CNV markers. CNV load analysis found no significant difference in total and average CNV length and CNV number in the AD+P or AD intermediate P groups compared with the AD-P group. Our analysis revealed a marginally significant lower number of duplication events in AD+P cases compared with AD-P controls (P=0.059) using multivariable regression model. The most interesting finding was the presence of a genome-wide significant duplication in the APC2 gene on chromosome 19, which was protective against developing AD+P (odds ratio=0.42; P=7.2E-10). We also observed suggestive associations of duplications with AD+P in the SET (P=1.95E-06), JAG2 (P=5.01E-07) and ZFPM1 (P=2.13E-07) genes and marginal association of a deletion in CNTLN (P=8.87E-04). We have identified potential novel loci for psychosis in Alzheimer's disease that warrant follow-up in large-scale independent studies.

Indexed as

DNA Copy Number VariationsAgedAged, 80 and overAlzheimer DiseaseCase-Control StudiesCell Cycle ProteinsCytoskeletal ProteinsDNA-Binding ProteinsFemaleGenetic Predisposition to DiseaseGenome-Wide Association StudyHistone ChaperonesHumansIntercellular Signaling Peptides and ProteinsJagged-2 ProteinMaleAPC2 protein, humanCell Cycle ProteinsCNTLN protein, humanCytoskeletal ProteinsDNA-Binding ProteinsHistone ChaperonesIntercellular Signaling Peptides and ProteinsJAG2 protein, humanJagged-2 ProteinMembrane ProteinsNuclear ProteinsSET protein, humanTranscription FactorsZFPM1 protein, human

Identifiers

PMID26035058
PMCPMC4490277
OpenAlexW1928416196

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.