Evidence map›Paper›PMID 26034275›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2015

A tyrosine-based motif in the HIV-1 envelope glycoprotein tail mediates cell-type- and Rab11-FIP1C-dependent incorporation into virions.

Mingli Qi, Hin Chu, Xuemin Chen, Junghwa Choi, Xiaoyun Wen, Jason Hammonds, Lingmei Ding, Eric Hunter, Paul Spearman

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 54 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 3 countries.

Mingli QiDepartment of Pediatrics, Emory University and Children's Healthcare of Atlanta, Atlanta, Georgia 30322;
Hin ChuDepartment of Microbiology, Queen Mary Hospital, University of Hong Kong, Hong Kong Special Administrative Region, China;
Xuemin ChenDepartment of Pediatrics, Emory University and Children's Healthcare of Atlanta, Atlanta, Georgia 30322;
Junghwa ChoiDepartment of Pediatrics, Emory University and Children's Healthcare of Atlanta, Atlanta, Georgia 30322;
Xiaoyun WenDepartment of Pediatrics, Emory University and Children's Healthcare of Atlanta, Atlanta, Georgia 30322;
Jason HammondsDepartment of Pediatrics, Emory University and Children's Healthcare of Atlanta, Atlanta, Georgia 30322;
Lingmei DingDepartment of Pediatrics, Emory University and Children's Healthcare of Atlanta, Atlanta, Georgia 30322;
Eric HunterEmory Vaccine Center, Yerkes National Primate Research Center, Emory University, Atlanta, GA 30322.
Paul SpearmanDepartment of Pediatrics, Emory University and Children's Healthcare of Atlanta, Atlanta, Georgia 30322; paul.spearman@emory.edu.
Children's Healthcare of Atlanta · USEmory University · USQueen Mary Hospital · CN

Funding

Yerkes National Primate Research Center Role of type-I IFN in regulating COVID-19 induced inflammation and pathogenesisP51OD011132 · OD · EMORY UNIVERSITY · PI Joon Sup Lee · 2012 to 2026
$167.0M
Viral and Cellular Determinants of HIV-1 AssemblyR01GM111027 · NIGMS · EMORY UNIVERSITY · PI SPEARMAN, PAUL W. · 2013 to 2019
$1.7M
NIGMS NIH HHS R01 GM111027NIH HHS P51 OD011132
6 · The paper itself

Abstract

Lentiviruses such as HIV-1 encode envelope glycoproteins (Env) with long cytoplasmic tails (CTs) that include motifs mediating interactions with host-cell-trafficking factors. We demonstrated recently that Rab11-family interacting protein 1C (FIP1C) is required for CT-dependent incorporation of Env into HIV-1 particles. Here, we used viruses bearing targeted substitutions within CT to map the FIP1C-dependent incorporation of Env. We identified YW795 as a critical motif mediating cell-type-dependent Env incorporation. Disruption of YW795 reproduced the cell-type-dependent particle incorporation of Env that had previously been observed with large truncations of CT. A revertant virus bearing a single amino acid change near the C terminus of CT restored wild-type levels of Env incorporation, Gag-Env colocalization on the plasma membrane, and viral replication. These findings highlight the importance of YW795 in the cell-type-dependent incorporation of Env and support a model of HIV assembly in which FIP1C/RCP mediates Env trafficking to the particle assembly site.

Indexed as

Adaptor Proteins, Signal TransducingAmino Acid MotifsAmino Acid SubstitutionCell LineCell Membranegag Gene Products, Human Immunodeficiency VirusGreen Fluorescent ProteinsHeLa CellsHIV-1HIV Envelope Protein gp41HumansMembrane ProteinsMutagenesisRecombinant Fusion ProteinsT-LymphocytesTyrosineAdaptor Proteins, Signal Transducinggag Gene Products, Human Immunodeficiency Virusgp41 protein, Human immunodeficiency virus 1Green Fluorescent ProteinsHIV Envelope Protein gp41Membrane ProteinsRAB11FIP1 protein, humanRecombinant Fusion ProteinsTyrosineFIP1CHIV assemblyHIV envelopepseudotypingRab coupling protein

Identifiers

PMID26034275
PMCPMC4475960
OpenAlexW1712056532

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.