Evidence map›Paper›PMID 26034272›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2015

Gain of cis-regulatory activities underlies novel domains of wingless gene expression in Drosophila.

Shigeyuki Koshikawa, Matt W Giorgianni, Kathy Vaccaro, Victoria A Kassner, John H Yoder, Thomas Werner, Sean B Carroll

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 57 papers.

0numbers the graph read from it
0cells of the map it votes in
57citing papers in PubMed
5.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

57 citing papers in PubMed, 108 citations in OpenAlex.

  1. Article
  2. Cis-regulatory evolution ofbioRxiv : the preprint server for biology · 2025
    Article
  3. Article
  4. Review
  5. Morphogens in the evolution of size, shape and patterning.Development (Cambridge, England) · 2024
    Review
  6. The origin and evolution of Wnt signalling.Nature reviews. Genetics · 2024
    Review
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Review
  18. Article
  19. Article
  20. RNAMethods and protocols · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Shigeyuki KoshikawaLaboratory of Molecular Biology, University of Wisconsin, Madison, WI 53706; Howard Hughes Medical Institute, University of Wisconsin, Madison, WI 53706; The Hakubi Center for Advanced Research and Graduate School of Science, Kyoto University, Kyoto 606-8502, Japan;
Matt W GiorgianniLaboratory of Molecular Biology, University of Wisconsin, Madison, WI 53706; Howard Hughes Medical Institute, University of Wisconsin, Madison, WI 53706;
Kathy VaccaroLaboratory of Molecular Biology, University of Wisconsin, Madison, WI 53706; Howard Hughes Medical Institute, University of Wisconsin, Madison, WI 53706;
Victoria A KassnerLaboratory of Molecular Biology, University of Wisconsin, Madison, WI 53706; Howard Hughes Medical Institute, University of Wisconsin, Madison, WI 53706;
John H YoderDepartment of Biological Sciences, University of Alabama, Tuscaloosa, AL 35487;
Thomas WernerDepartment of Biological Sciences, Michigan Technological University, Houghton, MI 49931.
Sean B CarrollLaboratory of Molecular Biology, University of Wisconsin, Madison, WI 53706; Howard Hughes Medical Institute, University of Wisconsin, Madison, WI 53706; carrolls@hhmi.org.
Howard Hughes Medical Institute · USUniversity of Wisconsin–Madison · USMichigan Technological University · USUniversity of Alabama · US

Funding

Howard Hughes Medical Institute
6 · The paper itself

Abstract

Changes in gene expression during animal development are largely responsible for the evolution of morphological diversity. However, the genetic and molecular mechanisms responsible for the origins of new gene-expression domains have been difficult to elucidate. Here, we sought to identify molecular events underlying the origins of three novel features of wingless (wg) gene expression that are associated with distinct pigmentation patterns in Drosophila guttifera. We compared the activity of cis-regulatory sequences (enhancers) across the wg locus in D. guttifera and Drosophila melanogaster and found strong functional conservation among the enhancers that control similar patterns of wg expression in larval imaginal discs that are essential for appendage development. For pupal tissues, however, we found three novel wg enhancer activities in D. guttifera associated with novel domains of wg expression, including two enhancers located surprisingly far away in an intron of the distant Wnt10 gene. Detailed analysis of one enhancer (the vein-tip enhancer) revealed that it overlapped with a region controlling wg expression in wing crossveins (crossvein enhancer) in D. guttifera and other species. Our results indicate that one novel domain of wg expression in D. guttifera wings evolved by co-opting pre-existing regulatory sequences governing gene activity in the developing wing. We suggest that the modification of existing enhancers is a common path to the evolution of new gene-expression domains and enhancers.

Indexed as

AnimalsAnimals, Genetically ModifiedDrosophilaDrosophila melanogasterDrosophila ProteinsEnhancer Elements, GeneticEvolution, MolecularGene Expression Regulation, DevelopmentalGenes, InsectGenetic Complementation TestMolecular Sequence DataSpecies SpecificityWings, AnimalWnt1 ProteinWnt ProteinsDrosophila Proteinswg protein, DrosophilaWnt10 protein, DrosophilaWnt1 ProteinWnt Proteinsdevelopmentenhancersgene regulationnoveltypigmentation

Identifiers

PMID26034272
PMCPMC4475944
OpenAlexW1586553466

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.