Evidence map›Paper›PMID 26030442›Full record

ArticlePloS one2015

Differential CARM1 Isoform Expression in Subcellular Compartments and among Malignant and Benign Breast Tumors.

David Shlensky, Jennifer A Mirrielees, Zibo Zhao, Lu Wang, Aparna Mahajan, Menggang Yu, Nathan M Sherer, Lee G Wilke, Wei Xu

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 15 citations in OpenAlex.

  1. Review
  2. The emerging role of CARM1 in cancer.Cellular oncology (Dordrecht, Netherlands) · 2024
    Review
  3. Review
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

David ShlenskyDepartment of Surgery, University of Wisconsin School of Medicine and Public Health, Madison, Wisconsin, United States of America.
Jennifer A MirrieleesDepartment of Surgery, University of Wisconsin School of Medicine and Public Health, Madison, Wisconsin, United States of America.
Zibo ZhaoDepartment of Oncology, University of Wisconsin School of Medicine and Public Health, Madison, Wisconsin, United States of America.
Lu WangDepartment of Oncology, University of Wisconsin School of Medicine and Public Health, Madison, Wisconsin, United States of America.
Aparna MahajanDepartment of Pathology and Laboratory Medicine, University of Wisconsin School of Medicine and Public Health, Madison, Wisconsin, United States of America.
Menggang YuDepartment of Biostatistics and Medical Informatics, University of Wisconsin School of Medicine and Public Health, Madison, Wisconsin, United States of America.
Nathan M ShererDepartment of Oncology, University of Wisconsin School of Medicine and Public Health, Madison, Wisconsin, United States of America.
Lee G WilkeDepartment of Surgery, University of Wisconsin School of Medicine and Public Health, Madison, Wisconsin, United States of America.
Wei XuDepartment of Oncology, University of Wisconsin School of Medicine and Public Health, Madison, Wisconsin, United States of America.
University of Wisconsin–Madison · US

Funding

UW COMPREHENSIVE CANCER CENTER SUPPORTP30CA014520 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI AMY TRENTHAM-DIETZ · 1985 to 2026
$142.6M
Surgery Summer Research Experience for Medical StudentsT35DK062709 · NIDDK · UNIVERSITY OF WISCONSIN-MADISON · PI MEZRICH, JOSHUA D · 2006 to 2023
$870k
NCI NIH HHS P30 CA014520NIDDK NIH HHS T35 DK062709NIDDK NIH HHS T35 DK062709-09
6 · The paper itself

Abstract

purposeCoactivator-associated arginine methyltransferase 1 (CARM1) is a coactivator for ERα and cancer-relevant transcription factors, and can methylate diverse cellular targets including histones. CARM1 is expressed in one of two alternative splice isoforms, full-length CARM1 (CARM1FL) and truncated CARM1 (CARM1ΔE15). CARM1FL and CARM1ΔE15 function differently in transcriptional regulation, protein methylation, and mediation of pre-mRNA splicing in cellular models.

methodsTo investigate the functional roles and the prognosis potential of CARM1 alternative spliced isoforms in breast cancer, we used recently developed antibodies to detect differential CARM1 isoform expression in subcellular compartments and among malignant and benign breast tumors.

resultsImmunofluorescence in MDA-MB-231 and BG-1 cell lines demonstrated that CARM1ΔE15 is the dominant isoform expressed in the cytoplasm, and CARM1FL is more nuclear localized. CARM1ΔE15 was found to be more sensitive to Hsp90 inhibition than CARM1FL, indicating that the truncated isoform may be the oncogenic form. Clinical cancer samples did not have significantly higher expression of CARM1FL or CARM1ΔE15 than benign breast samples at the level of mRNA or histology. Furthermore neither CARM1FL nor CARM1ΔE15 expression correlated with breast cancer molecular subtypes, tumor size, or lymph node involvement.

conclusionsThe analysis presented here lends new insights into the possible oncogenic role of CARM1ΔE15. This study also demonstrates no obvious association of CARM1 isoform expression and clinical correlates in breast cancer. Recent studies, however, have shown that CARM1 expression correlates with poor prognosis, indicating a need for further studies of both CARM1 isoforms in a large cohort of breast cancer specimens.

Indexed as

Gene Expression Regulation, NeoplasticBenzoquinonesBreast NeoplasmsCell Line, TumorCell ProliferationCytoplasmDiagnosis, DifferentialGene Knockout TechniquesHSP90 Heat-Shock ProteinsHumansIntracellular SpaceIsoenzymesLactams, MacrocyclicProtein-Arginine N-MethyltransferasesProtein TransportBenzoquinonescoactivator-associated arginine methyltransferase 1HSP90 Heat-Shock ProteinsIsoenzymesLactams, MacrocyclicProtein-Arginine N-Methyltransferasestanespimycin

Identifiers

PMID26030442
PMCPMC4451767
OpenAlexW1499340307

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.