Evidence map›Paper›PMID 26029871›Full record

ArticleNature genetics2015

An allelic series of miR-17 ∼ 92-mutant mice uncovers functional specialization and cooperation among members of a microRNA polycistron.

Yoon-Chi Han, Joana A Vidigal, Ping Mu, Evelyn Yao, Irtisha Singh, Alvaro J González, Carla P Concepcion, Ciro Bonetti, Paul Ogrodowski, Brett Carver and 4 more

Abstract read
In one paragraph

Article in Nature genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 75 papers.

0numbers the graph read from it
0cells of the map it votes in
75citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

75 citing papers in PubMed.

  1. Article
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  8. Review
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  10. AGO2 silences mobile transposons in the nucleus of quiescent cells.Nature structural & molecular biology · 2023
    Article
  11. Article
  12. Article
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  14. Article
  15. Article
  16. Article
  17. Article
  18. Interplay between K-RAS and miRNAs.Trends in cancer · 2022
    Review
  19. Article
  20. Article

15 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Yoon-Chi Han1] Cancer Biology and Genetics Program, Memorial Sloan Kettering Cancer Center, New York, New York, USA. [2] Oncology Research Unit, Pfizer, Inc., Pearl River, New York, USA.
Joana A VidigalCancer Biology and Genetics Program, Memorial Sloan Kettering Cancer Center, New York, New York, USA.ORCID 0000000327656985
Ping Mu1] Cancer Biology and Genetics Program, Memorial Sloan Kettering Cancer Center, New York, New York, USA. [2] Weill Cornell Graduate School of Medical Sciences of Cornell University, New York, New York, USA.
Evelyn Yao1] Cancer Biology and Genetics Program, Memorial Sloan Kettering Cancer Center, New York, New York, USA. [2] Weill Cornell Graduate School of Medical Sciences of Cornell University, New York, New York, USA.
Irtisha SinghComputational Biology Program, Memorial Sloan Kettering Cancer Center, New York, New York, USA.
Alvaro J GonzálezComputational Biology Program, Memorial Sloan Kettering Cancer Center, New York, New York, USA.
Carla P Concepcion1] Cancer Biology and Genetics Program, Memorial Sloan Kettering Cancer Center, New York, New York, USA. [2] Weill Cornell Graduate School of Medical Sciences of Cornell University, New York, New York, USA.
Ciro BonettiCancer Biology and Genetics Program, Memorial Sloan Kettering Cancer Center, New York, New York, USA.
Paul OgrodowskiCancer Biology and Genetics Program, Memorial Sloan Kettering Cancer Center, New York, New York, USA.
Brett Carver1] Human Oncology and Pathogenesis Program. Memorial Sloan Kettering Cancer Center, New York, New York, USA. [2] Department of Surgery, Memorial Sloan Kettering Cancer Center, New York, New York, USA.
Licia SelleriDepartment of Cell and Developmental Biology, Weill Cornell Medical College, New York, New York, USA.
Doron Betel1] Division of Hematology and Medical Oncology, Department of Medicine, Weill Cornell Medical College, New York, New York, USA. [2] Institute for Computational Biomedicine, Weill Cornell Medical College, New York, New York, USA.
Christina LeslieComputational Biology Program, Memorial Sloan Kettering Cancer Center, New York, New York, USA.
Andrea VenturaCancer Biology and Genetics Program, Memorial Sloan Kettering Cancer Center, New York, New York, USA.

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Nicholas D Socci · 1985 to 2026
$347.4M
Investigating the functions of the miR-17~92 family of oncogenic microRNA clustersR01CA149707 · NCI · SLOAN-KETTERING INST CAN RESEARCH · PI VENTURA, ANDREA · 2010 to 2021
$3.8M
Defining Response and Resistance to PI3K and AR inhibition in Prostate CancerR01CA182503 · NCI · SLOAN-KETTERING INST CAN RESEARCH · PI CARVER, BRETT STEWART · 2014 to 2018
$2.2M
Investigating the tumor suppressive functions of the miR-34 family of microRNAsF31CA168356 · NCI · WEILL MEDICAL COLL OF CORNELL UNIV · PI CONCEPCION-CRISOL, CARLA P · 2013 to 2015
$128k
NCI NIH HHS F31 CA168356NCI NIH HHS F31CA168356NCI NIH HHS P30 CA008748NCI NIH HHS P30CA008748NCI NIH HHS R01 CA149707NCI NIH HHS R01CA149707NCI NIH HHS R01 CA182503
6 · The paper itself

Abstract

Polycistronic microRNA (miRNA) clusters are a common feature of vertebrate genomes. The coordinated expression of miRNAs belonging to different seed families from a single transcriptional unit suggests functional cooperation, but this hypothesis has not been experimentally tested. Here we report the characterization of an allelic series of genetically engineered mice harboring selective targeted deletions of individual components of the miR-17 ∼ 92 cluster. Our results demonstrate the coexistence of functional cooperation and specialization among members of this cluster, identify a previously undescribed function for the miR-17 seed family in controlling axial patterning in vertebrates and show that loss of miR-19 selectively impairs Myc-driven tumorigenesis in two models of human cancer. By integrating phenotypic analysis and gene expression profiling, we provide a genome-wide view of how the components of a polycistronic miRNA cluster affect gene expression in vivo. The reagents and data sets reported here will accelerate exploration of the complex biological functions of this important miRNA cluster.

Indexed as

AnimalsApoptosisB-LymphocytesCarcinogenesisCells, CulturedEyelidsGene FrequencyGenes, LethalGenome-Wide Association StudyIntellectual DisabilityLimb Deformities, CongenitalMaleMice, 129 StrainMice, Inbred C57BLMice, TransgenicMicrocephalyMicroRNAsMIRN17-92 microRNA, mouse

Identifiers

PMID26029871
PMCPMC4485521

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.