Evidence map›Paper›PMID 26029261›Full record

ArticleEvolutionary applications2015

Genotyping-by-sequencing approach indicates geographic distance as the main factor affecting genetic structure and gene flow in Brazilian populations of Grapholita molesta (Lepidoptera, Tortricidae).

Karina Lucas Silva-Brandão, Oscar Arnaldo Batista Neto E Silva, Marcelo Mendes Brandão, Celso Omoto, Felix A H Sperling

Open access · goldAbstract read
In one paragraph

Article in Evolutionary applications, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
4.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 27 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Karina Lucas Silva-BrandãoLaboratório de Melhoramento de Plantas, Centro de Energia Nuclear na Agricultura, Universidade de São Paulo Piracicaba, SP, Brazil.
Oscar Arnaldo Batista Neto E SilvaDepartamento de Entomologia e Acarologia, Escola Superior de Agricultura 'Luiz de Queiroz', Universidade de São Paulo Piracicaba, SP, Brazil.
Marcelo Mendes BrandãoCentro de Biologia Molecular e Engenharia Genética, Universidade Estadual de Campinas Campinas, SP, Brazil.
Celso OmotoDepartamento de Entomologia e Acarologia, Escola Superior de Agricultura 'Luiz de Queiroz', Universidade de São Paulo Piracicaba, SP, Brazil.
Felix A H SperlingDepartment of Biological Sciences, CW405 Biological Sciences Centre, University of Alberta Edmonton, AB, Canada.
Universidade de São Paulo · BRUniversidade Estadual de Campinas (UNICAMP) · BRUniversity of Alberta · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The oriental fruit moth Grapholita molesta is one of the major pests of stone and pome fruit species in Brazil. Here, we applied 1226 SNPs obtained by genotyping-by-sequencing to test whether host species associations or other factors such as geographic distance structured populations of this pest. Populations from the main areas of occurrence of G. molesta were sampled principally from peach and apple orchards. Three main clusters were recovered by neighbor-joining analysis, all defined by geographic proximity between sampling localities. Overall genetic structure inferred by a nonhierarchical amova resulted in a significant ΦST value = 0.19109. Here, we demonstrate for the first time that SNPs gathered by genotyping-by-sequencing can be used to infer genetic structure of a pest insect in Brazil; moreover, our results indicate that those markers are very informative even over a restricted geographic scale. We also demonstrate that host plant association has little effect on genetic structure among Brazilian populations of G. molesta; on the other hand, reduced gene flow promoted by geographic isolation has a stronger impact on population differentiation.

Indexed as

genetic structurehost plant associationoriental fruit mothsingle-nucleotide polymorphisms

Identifiers

PMID26029261
PMCPMC4430771
OpenAlexW2018582209

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.