Evidence map›Paper›PMID 26029231›Full record

ArticleFrontiers in plant science2015

Low temperature conditioning of garlic (Allium sativum L.) "seed" cloves induces alterations in sprouts proteome.

Miguel D Dufoo-Hurtado, José Á Huerta-Ocampo, Alberto Barrera-Pacheco, Ana P Barba de la Rosa, Edmundo M Mercado-Silva

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 27 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Miguel D Dufoo-HurtadoLaboratorio de Fisiología y Bioquímica Poscosecha de Frutas y Hortalizas, Departamento de Investigación y Posgrado, Facultad de Química, Universidad Autónoma de Querétaro Querétaro, Mexico.
José Á Huerta-OcampoLaboratorio de Proteómica y Biomedicina Molecular, División de Biología Molecular, Instituto Potosino de Investigación Científica y Tecnológica A.C. San Luis Potosí, Mexico.
Alberto Barrera-PachecoLaboratorio de Proteómica y Biomedicina Molecular, División de Biología Molecular, Instituto Potosino de Investigación Científica y Tecnológica A.C. San Luis Potosí, Mexico.
Ana P Barba de la RosaLaboratorio de Proteómica y Biomedicina Molecular, División de Biología Molecular, Instituto Potosino de Investigación Científica y Tecnológica A.C. San Luis Potosí, Mexico.
Edmundo M Mercado-SilvaLaboratorio de Fisiología y Bioquímica Poscosecha de Frutas y Hortalizas, Departamento de Investigación y Posgrado, Facultad de Química, Universidad Autónoma de Querétaro Querétaro, Mexico.
Institute for Scientific and Technological Research · MXAutonomous University of Queretaro · MX

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Low-temperature conditioning of garlic "seed" cloves substitutes the initial climatic requirements of the crop and accelerates the cycle. We have reported that "seed" bulbs from "Coreano" variety conditioned at 5°C for 5 weeks reduces growth and plant weight as well as the crop yields and increases the synthesis of phenolic compounds and anthocyanins. Therefore, this treatment suggests a cold stress. Plant acclimation to stress is associated with deep changes in proteome composition. Since proteins are directly involved in plant stress response, proteomics studies can significantly contribute to unravel the possible relationships between protein abundance and plant stress acclimation. The aim of this work was to study the changes in the protein profiles of garlic "seed" cloves subjected to conditioning at low-temperature using proteomics approach. Two sets of garlic bulbs were used, one set was stored at room temperature (23°C), and the other was conditioned at low temperature (5°C) for 5 weeks. Total soluble proteins were extracted from sprouts of cloves and separated by two-dimensional gel electrophoresis. Protein spots showing statistically significant changes in abundance were analyzed by LC-ESI-MS/MS and identified by database search analysis using the Mascot search engine. The results revealed that low-temperature conditioning of garlic "seed" cloves causes alterations in the accumulation of proteins involved in different physiological processes such as cellular growth, antioxidative/oxidative state, macromolecules transport, protein folding and transcription regulation process. The metabolic pathways affected include protein biosynthesis and quality control system, photosynthesis, photorespiration, energy production, and carbohydrate and nucleotide metabolism. These processes can work cooperatively to establish a new cellular homeostasis that might be related with the physiological and biochemical changes observed in previous studies.

Indexed as

Allium sativumcold conditioningLC-ESI-MS/MSsproutstwo-dimensional electrophoresis

Identifiers

PMID26029231
PMCPMC4429546
OpenAlexW1511975956

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.