Evidence map›Paper›PMID 26029177›Full record

ArticleFrontiers in microbiology2015

Examining the impact of acetylene on N-fixation and the active sediment microbial community.

Robinson W Fulweiler, Elise M Heiss, Mary Kate Rogener, Silvia E Newell, Gary R LeCleir, Sarah M Kortebein, Steven W Wilhelm

Abstract read
In one paragraph

Article in Frontiers in microbiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Article
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  11. Revisiting the distribution of oceanic NNature communications · 2019
    Article
  12. Global Marine NFrontiers in microbiology · 2018
    Review
  13. Article
  14. Article
  15. Nitrogen fixing bacterial diversity in a tropical estuarine sediments.World journal of microbiology & biotechnology · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Robinson W FulweilerDepartment of Earth and Environment, Boston University Boston, MA, USA ; Department of Biology, Boston University Boston, MA, USA.
Elise M HeissDepartment of Earth and Environment, Boston University Boston, MA, USA ; Department of Chemistry and Physics, King's College Wilkes-Barre, PA, USA.
Mary Kate RogenerDepartment of Earth and Environment, Boston University Boston, MA, USA ; Department of Marine Sciences, University of Georgia Athens, GA, USA.
Silvia E NewellDepartment of Earth and Environment, Boston University Boston, MA, USA ; Department of Earth and Environmental Sciences, Wright State University Dayton, OH, USA.
Gary R LeCleirDepartment of Microbiology, University of Tennessee Knoxville, TN, USA.
Sarah M KortebeinDepartment of Microbiology, University of Tennessee Knoxville, TN, USA.
Steven W WilhelmDepartment of Microbiology, University of Tennessee Knoxville, TN, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Here we examined the impact of a commonly employed method used to measure nitrogen fixation, the acetylene reduction assay (ARA), on a marine sediment community. Historically, the ARA technique has been broadly employed for its ease of use, in spite of numerous known artifacts. To gauge the severity of these effects in a natural environment, we employed high-throughput 16S rRNA gene sequencing to detect differences in acetylene-treated sediments vs. non-treated control sediments after a 7 h incubation. Within this short time period, significant differences were seen across all activity of microbes identified in the sediment, implying that the changes induced by acetylene occur quickly. The results have important implications for our understanding of marine nitrogen budgets. Moreover, because the ARA technique has been widely used in terrestrial and freshwater habitats, these results may be applicable to other ecosystems.

Indexed as

acetylene reduction assayheterotrophic nitrogen fixationhigh throughput sequencingsedimentssulfate-reducing bacteria

Identifiers

PMID26029177
PMCPMC4428210

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.