Evidence map›Paper›PMID 26025899›Full record

ArticleApplied and environmental microbiology2015

Development of Multiple-Locus Variable-Number Tandem-Repeat Analysis for Molecular Subtyping of Campylobacter jejuni by Using Capillary Electrophoresis.

Punnida Techaruvichit, Hajime Takahashi, Mongkol Vesaratchavest, Suwimon Keeratipibul, Takashi Kuda, Bon Kimura

Abstract readComparative StudyEvaluation Study
In one paragraph

Article in Applied and environmental microbiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Prevalence and antimicrobial resistance ofOne health (Amsterdam, Netherlands) · 2025
    Review
  2. MLVA typing ofIranian journal of microbiology · 2018
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Punnida TecharuvichitDepartment of Food Science and Technology, Tokyo University of Marine Science and Technology, Minato, Tokyo, Japan.
Hajime TakahashiDepartment of Food Science and Technology, Tokyo University of Marine Science and Technology, Minato, Tokyo, Japan hajime@kaiyodai.ac.jp.
Mongkol VesaratchavestResearch and Development Center of BETAGRO Group, Klong Luang, Pathumthani, Thailand.
Suwimon KeeratipibulDepartment of Food Technology, Chulalongkorn University, Bangkok, Thailand.
Takashi KudaDepartment of Food Science and Technology, Tokyo University of Marine Science and Technology, Minato, Tokyo, Japan.
Bon KimuraDepartment of Food Science and Technology, Tokyo University of Marine Science and Technology, Minato, Tokyo, Japan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Campylobacter jejuni is a common cause of the frequently reported food-borne diseases in developed and developing nations. This study describes the development of multiple-locus variable-number tandem-repeat (VNTR) analysis (MLVA) using capillary electrophoresis as a novel typing method for microbial source tracking and epidemiological investigation of C. jejuni. Among 36 tandem repeat loci detected by the Tandem Repeat Finder program, 7 VNTR loci were selected and used for characterizing 60 isolates recovered from chicken meat samples from retail shops, samples from chicken meat processing factory, and stool samples. The discrimination ability of MLVA was compared with that of multilocus sequence typing (MLST). MLVA (diversity index of 0.97 with 31 MLVA types) provided slightly higher discrimination than MLST (diversity index of 0.95 with 25 MLST types). The overall concordance between MLVA and MLST was estimated at 63% by adjusted Rand coefficient. MLVA predicted MLST type better than MLST predicted MLVA type, as reflected by Wallace coefficient (Wallace coefficient for MLVA to MLST versus MLST to MLVA, 86% versus 51%). MLVA is a useful tool and can be used for effective monitoring of C. jejuni and investigation of epidemics caused by C. jejuni.

Indexed as

Minisatellite RepeatsAnimalsCampylobacter jejuniChickensDNA, BacterialElectrophoresis, CapillaryEnvironmental MicrobiologyFecesFood HandlingMeatMolecular EpidemiologyMolecular Sequence DataMolecular TypingSequence Analysis, DNADNA, Bacterial

Identifiers

PMID26025899
PMCPMC4510157

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.