Evidence map›Paper›PMID 26025476›Full record

ArticleHuman genetics2015

Genetic polymorphism of APOB is associated with diabetes mellitus in sickle cell disease.

Xu Zhang, Wei Zhang, Santosh L Saraf, Mehdi Nouraie, Jin Han, Michel Gowhari, Johara Hassan, Galina Miasnikova, Adelina Sergueeva, Sergei Nekhai and 8 more

Abstract read
In one paragraph

Article in Human genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed, 2 pooled it
0.3field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 2 syntheses or guidelines pooled it, 19 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Trial
  4. Article
  5. Endocrinopathies in Hemoglobinopathies: What Is the Role of Iron?International journal of molecular sciences · 2023
    Review
  6. Pulmonary circulation · 2023
    Article
  7. Article
  8. Article
  9. Type 2 diabetes mellitus: pathogenesis and genetic diagnosis.Journal of diabetes and metabolic disorders · 2020
    Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 8 institutions in 2 countries.

Xu ZhangComprehensive Sickle Cell Center, Section of Hematology/Oncology, Department of Medicine, University of Illinois at Chicago, Chicago, IL, USA, xuzhangchicago@gmail.com.
Wei Zhang
Santosh L Saraf
Mehdi Nouraie
Jin Han
Michel Gowhari
Johara Hassan
Galina Miasnikova
Adelina Sergueeva
Sergei Nekhai
Rick Kittles
Roberto F Machado
Joe G N Garcia
Mark T Gladwin
Martin H Steinberg
Paola Sebastiani
Donald A McClain
Victor R Gordeuk
University of Illinois Chicago · USBoston University · USHoward University · USUniversity of Arizona · USChuvash State University · RUNorthwestern University · USUniversity of Pittsburgh · USWake Forest University · US

Funding

Re-Engineering Translational Research at the University of ChicagoUL1TR000430 · NCATS · UNIVERSITY OF CHICAGO · PI SOLWAY, JULIAN · 2012 to 2016
$20.2M
PROTEOMICS CORE FACILITYG12MD007597 · NIMHD · HOWARD UNIVERSITY · PI SOUTHERLAND, WILLIAM M. · 2012 to 2018
$14.8M
Vascular Targeting Genomic & Genetic Strategies for Acute Chest SyndromeR01HL111656 · NHLBI · UNIVERSITY OF MARYLAND BALTIMORE · PI Roberto F. Machado · 2013 to 2026
$7.9M
Pulmonary Hypertension and the Hypoxic Response in SCDR01HL079912 · NHLBI · HOWARD UNIVERSITY · PI GORDEUK, VICTOR R · 2005 to 2008
$7.4M
Center for Hemoglobin Research in Minorities (CHaRM)P50HL118006 · NHLBI · HOWARD UNIVERSITY · PI NEKHAI, SERGEI · 2013 to 2017
$7.0M
Sickle Cell Disease and Sickle Cell Trait Protection Against HIV-1-infection in Africans and African AmericansR01HL125005 · NHLBI · HOWARD UNIVERSITY · PI MARINA A JEREBTSOVA, SERGEI NEKHAI · 2014 to 2026
$6.7M
Howard University Research Scientist AwardR25HL003679 · NHLBI · HOWARD UNIVERSITY · PI NEKHAI, SERGEI · 2005 to 2009
$1.7M
Carbon monoxide therapy for severe pulmonary arterial hypertensionK23HL098454 · NHLBI · UNIVERSITY OF ILLINOIS AT CHICAGO · PI MACHADO, ROBERTO F. · 2010 to 2014
$657k
Center for Clinical and Translational ScienceKL2TR000048 · NCATS · UNIVERSITY OF ILLINOIS AT CHICAGO · PI AZAR, DIMITRI T, MERMELSTEIN, ROBIN J. · 2012 to 2014
$559k
NHLBI Research Center at Howard UniversityP30HL107253 · NHLBI · HOWARD UNIVERSITY · PI TAYLOR, ROBERT E. · 2011 to 2012
$414k
Iron, the circadian clock, and diabetes riskI01BX001140 · VA · W G HEFNER VA MEDICAL CENTER · PI MCCLAIN, DONALD A. · 2011 to 2018
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BLRD VA I01 BX001140NCATS NIH HHS KL2 TR000048NCATS NIH HHS KL2TR000048NCATS NIH HHS UL1 TR000430NHLBI NIH HHS 1P30HL107253NHLBI NIH HHS 2 R25-HL03679-08NHLBI NIH HHS K23 HL098454NHLBI NIH HHS K23HL098454NHLBI NIH HHS P30 HL107253NHLBI NIH HHS P50 HL118006NHLBI NIH HHS P50HL118006NHLBI NIH HHS R01 HL079912NHLBI NIH HHS R01HL079912-04NHLBI NIH HHS R01 HL111656NHLBI NIH HHS R01HL111656NHLBI NIH HHS R01 HL125005NHLBI NIH HHS R25 HL003679NIDDK NIH HHS L30 DK099990NIMHD NIH HHS G12 MD007597
6 · The paper itself

Abstract

Environmental variations have strong influences in the etiology of type 2 diabetes mellitus. In this study, we investigated the genetic basis of diabetes in patients with sickle cell disease (SCD), a Mendelian disorder accompanied by distinct physiological conditions of hypoxia and hyperactive erythropoiesis. Compared to the general African American population, the prevalence of diabetes as assessed in two SCD cohorts of 856 adults was low, but it markedly increased with older age and overweight. Meta-analyses of over 5 million single-nucleotide polymorphisms (SNPs) in the two SCD cohorts identified a SNP, rs59014890, the C allele of which associated with diabetes risk at P = 3.2 × 10(-8) and, surprisingly, associated with decreased APOB expression in peripheral blood mononuclear cells (PBMCs). The risk allele of the APOB polymorphism was associated with overweight in 181 SCD adolescents, with diabetes risk in 592 overweight, non-SCD African Americans ≥ 45 years of age, and with elevated plasma lipid concentrations in general populations. In addition, lower expression level of APOB in PBMCs was associated with higher values for percent hemoglobin A1C and serum total cholesterol and triglyceride concentrations in patients with Chuvash polycythemia, a congenital disease with elevated hypoxic responses and increased erythropoiesis at normoxia. Our study reveals a novel, environment-specific genetic polymorphism that may affect key metabolic pathways contributing to diabetes in SCD.

Indexed as

AllelesPolymorphism, Single NucleotideAdolescentAdultAgedAged, 80 and overAnemia, Sickle CellApolipoprotein B-100Black or African AmericanCholesterolCohort StudiesDiabetes Mellitus, Type 2FemaleGenome-Wide Association StudyHemoglobinsHumansAPOB protein, humanApolipoprotein B-100CholesterolHemoglobinsTriglycerides

Identifiers

PMID26025476
PMCPMC4607040
OpenAlexW799795405

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.