Evidence map›Paper›PMID 26023710›Full record

ArticleThe journal of physical chemistry. B2015

Rapid Filament Supramolecular Chirality Reversal of HET-s (218-289) Prion Fibrils Driven by pH Elevation.

Maruda Shanmugasundaram, Dmitry Kurouski, William Wan, Gerald Stubbs, Rina K Dukor, Laurence A Nafie, Igor K Lednev

Abstract read
In one paragraph

Article in The journal of physical chemistry. B, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Maruda Shanmugasundaram†Department of Chemistry, University at Albany, State University of New York, 1400 Washington Avenue, Albany, New York 12222, United States.
Dmitry Kurouski†Department of Chemistry, University at Albany, State University of New York, 1400 Washington Avenue, Albany, New York 12222, United States.
William Wan§Department of Biological Sciences and Center for Structural Biology, Vanderbilt University, Nashville, Tennessee 37235, United States.
Gerald Stubbs§Department of Biological Sciences and Center for Structural Biology, Vanderbilt University, Nashville, Tennessee 37235, United States.
Rina K Dukor⊥BioTools Incorporated, 17546 Bee Line Highway, Jupiter, Florida 33458, United States.
Laurence A Nafie⊥BioTools Incorporated, 17546 Bee Line Highway, Jupiter, Florida 33458, United States.
Igor K Lednev†Department of Chemistry, University at Albany, State University of New York, 1400 Washington Avenue, Albany, New York 12222, United States.

Funding

VIRAL DEGENERATIVE DEMENTING DISEASE IN AGING (SUPP)P01AG002132 · NIA · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI SCHNIER, PAUL · 1985 to 2024
$51.7M
Structure and assembly of the fungal prion HET-sF31AG040947 · NIA · VANDERBILT UNIVERSITY · PI WAN, WILLIAM N · 2011 to 2013
$68k
NIA NIH HHS AG002132NIA NIH HHS F31 AG040947NIA NIH HHS F31-AG040947NIA NIH HHS P01 AG002132
6 · The paper itself

Abstract

Amyloid fibril polymorphism is not well understood despite its potential importance for biological activity and associated toxicity. Controlling the polymorphism of mature fibrils including their morphology and supramolecular chirality by postfibrillation changes in the local environment is the subject of this study. Specifically, the effect of pH on the stability and dynamics of HET-s (218-289) prion fibrils has been determined through the use of vibrational circular dichroism (VCD), deep UV resonance Raman, and fluorescence spectroscopies. It was found that a change in solution pH causes deprotonation of Asp and Glu amino acid residues on the surface of HET-s (218-289) prion fibrils and triggers rapid transformation of one supramolecular chiral polymorph into another. This process involves changes in higher order arrangements like lateral filament and fibril association and their supramolecular chirality, while the fibril cross-β core remains intact. This work suggests a hypothetical mechanism for HET-s (218-289) prion fibril refolding and proposes that the interconversion between fibril polymorphs driven by the solution environment change is a general property of amyloid fibrils.

Indexed as

Hydrogen-Ion ConcentrationCircular DichroismEscherichia coliMicroscopy, Atomic ForcePrionsProtein FoldingProtein Structure, SecondarySpectrophotometry, InfraredSpectrum Analysis, RamanPrions

Identifiers

PMID26023710
PMCPMC7341905

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.