Evidence map›Paper›PMID 26023005›Full record

ArticleMycorrhiza2016

Arbuscular mycorrhizal fungal communities and Rhizophagus irregularis populations shift in response to short-term ploughing and fertilisation in a buffer strip.

M Peyret-Guzzon, H Stockinger, M-L Bouffaud, P Farcy, D Wipf, D Redecker

Abstract read
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In one paragraph

Article in Mycorrhiza, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  5. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

M Peyret-GuzzonINRA, UMR 1347 Agroécologie, 17 Rue Sully, BP 86510, 21065, Dijon Cedex, France.
H StockingerINRA, UMR 1347 Agroécologie, 17 Rue Sully, BP 86510, 21065, Dijon Cedex, France.
M-L BouffaudINRA, UMR 1347 Agroécologie, 17 Rue Sully, BP 86510, 21065, Dijon Cedex, France.
P FarcyDomaine Expérimental d'Epoisses, UE 0115 INRA, Dijon, 21110, Bretenières, France.
D WipfUniversité de Bourgogne, UMR 1347 Agroécologie, 17 Rue Sully, BP 86510, 21065, Dijon Cedex, France.
D RedeckerUniversité de Bourgogne, UMR 1347 Agroécologie, 17 Rue Sully, BP 86510, 21065, Dijon Cedex, France. dirk.redecker@dijon.inra.fr.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Short-term effects of soil physical disturbance by ploughing and nitrogen and phosphate fertilisation on arbuscular mycorrhizal fungal (AMF) communities and on intraspecific populations of Rhizophagus irregularis in a buffer strip surrounded by arable fields were studied. Pre-grown Plantago lanceolata plantlets were transplanted into fertilised and/or ploughed experimental plots. After 3 months, the glomeromycotan communities in the roots of these trap plants were analysed using 454 pyrosequencing of a fragment of the RNA polymerase II gene (RPB1). Intraspecific populations of R. irregularis were studied by restriction fragment length polymorphism (RFLP) analysis of the mitochondrial large ribosomal subunit (mtLSU) gene. Soil disturbance significantly increased the diversity of species-level molecular taxa (MTs) and altered community structure, whilst fertilisation alone had no significant effect, unless coupled with ploughing. At the population level, the expected shift from genotypes of R. irregularis typically found in grasslands to those usually found in arable sites was only partially observed. In conclusion, in the short-term, physical soil disturbance, as well as nitrogen fertilisation when coupled with physical soil disturbance, affected AMF community and to a smaller extent population composition.

Indexed as

AgricultureDNA, FungalDNA, MitochondrialDNA, RibosomalFertilizersGenetic VariationGlomeromycotaGrasslandMitochondrial RibosomesMycorrhizaePlant RootsRibosome Subunits, LargeRNA Polymerase IISequence Analysis, DNASoilSoil MicrobiologyDNA, FungalDNA, MitochondrialDNA, RibosomalFertilizersRNA Polymerase IISoilFertilisationGlomeromycotamtLSUNext-generation sequencingRPB1Tillage

Identifiers

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.