Evidence map›Paper›PMID 26018083›Full record

ArticleThe Journal of biological chemistry2015

Lipid and Carbohydrate Modifications of α-Galactosylceramide Differently Influence Mouse and Human Type I Natural Killer T Cell Activation.

Alysia Birkholz, Marek Nemčovič, Esther Dawen Yu, Enrico Girardi, Jing Wang, Archana Khurana, Nora Pauwels, Elisa Farber, Sampada Chitale, Richard W Franck and 5 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 21 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 6 institutions in 2 countries.

Alysia BirkholzFrom the Division of Cell Biology and Division of Developmental Immunology,La Jolla Institute for Allergy and Immunology, La Jolla, California 92037, the Division of Biological Sciences, University of California at San Diego, La Jolla, California 92037.
Marek NemčovičFrom the Division of Cell Biology and.
Esther Dawen YuFrom the Division of Cell Biology and.
Enrico GirardiFrom the Division of Cell Biology and.
Jing WangFrom the Division of Cell Biology and.
Archana KhuranaDivision of Developmental Immunology,La Jolla Institute for Allergy and Immunology, La Jolla, California 92037.
Nora Pauwelsthe Laboratory for Medicinal Chemistry, Department of Pharmaceutics, Ghent University, 9000 Ghent, Belgium.
Elisa Farberthe Department of Chemistry, University of Connecticut, Storrs, Connecticut 06269, and.
Sampada Chitalethe Department of Chemistry, University of Connecticut, Storrs, Connecticut 06269, and.
Richard W Franckthe Department of Chemistry, Hunter College of City University of New York, New York, New York 10021.
Moriya Tsujithe Aaron Diamond AIDS Research Center, The Rockefeller University, New York, New York 10016.
Amy Howellthe Department of Chemistry, University of Connecticut, Storrs, Connecticut 06269, and.
Serge Van Calenberghthe Laboratory for Medicinal Chemistry, Department of Pharmaceutics, Ghent University, 9000 Ghent, Belgium.
Mitchell KronenbergDivision of Developmental Immunology,La Jolla Institute for Allergy and Immunology, La Jolla, California 92037, the Division of Biological Sciences, University of California at San Diego, La Jolla, California 92037.
Dirk M ZajoncFrom the Division of Cell Biology and the Department of Internal Medicine, Faculty of Medicine and Health Sciences, Ghent University, 9000 Ghent, Belgium dzajonc@lji.org.
La Jolla Institute for Immunology · USGhent University · BEUniversity of Connecticut · USAaron Diamond AIDS Research Center · USCity University of New York · USUniversity of California, San Diego · US

Funding

X-ray Absorption Spectroscopy (XAS) pp.711-759P41GM103393 · NIGMS · STANFORD UNIVERSITY · PI HODGSON, KEITH O · 2012 to 2019
$30.6M
Development and Function of NKT CellsR37AI071922 · NIAID · LA JOLLA INSTITUTE FOR IMMUNOLOGY · PI KRONENBERG, MITCHELL · 2006 to 2015
$4.9M
Recognition of bacterial antigens by NKT cellsR01AI045053 · NIAID · LA JOLLA INSTITUTE FOR IMMUNOLOGY · PI KRONENBERG, MITCHELL · 2000 to 2010
$3.3M
Differentiation of subsets of NKT cellsR01AI071922 · NIAID · LA JOLLA INSTITUTE FOR IMMUNOLOGY · PI KRONENBERG, MITCHELL · 2016 to 2020
$2.7M
CD1d/NKT-binding glycolipids in enhancing the immunogenicity of a malaria vaccineR01AI070258 · NIAID · AARON DIAMOND AIDS RESEARCH CENTER · PI TSUJI, MORIYA · 2012 to 2016
$2.2M
Structural Immunology of CD1 and CD1-TCR ComplexesR01AI074952 · NIAID · LA JOLLA INSTITUTE FOR IMMUNOLOGY · PI ZAJONC, DIRK M · 2009 to 2013
$1.8M
Harnessing NKT Cell Activation by GlycolipidsR01GM087136 · NIGMS · UNIVERSITY OF CONNECTICUT STORRS · PI HOWELL, AMY · 2009 to 2010
$536k
Structure and function of peptide presentation by CD1dR21AI107318 · NIAID · LA JOLLA INSTITUTE FOR IMMUNOLOGY · PI ZAJONC, DIRK M · 2013 to 2014
$471k
NIAID NIH HHS AI71922NIAID NIH HHS R01 AI045053NIAID NIH HHS R01 AI070258NIAID NIH HHS R01 AI071922NIAID NIH HHS R01 AI074952NIAID NIH HHS R01 AI45053NIAID NIH HHS R21 AI107318NIAID NIH HHS R37 AI071922NIGMS NIH HHS P41 GM103393NIGMS NIH HHS P41GM103393NIGMS NIH HHS R01 GM087136
6 · The paper itself

Abstract

The ability of different glycosphingolipids (GSLs) to activate type I natural killer T cells (NKT cells) has been known for 2 decades. The possible therapeutic use of these GSLs has been studied in many ways; however, studies are needed in which the efficacy of promising GSLs is compared under identical conditions. Here, we compare five unique GSLs structurally derived from α-galactosylceramide. We employed biophysical and biological assays, as well as x-ray crystallography to study the impact of the chemical modifications of the antigen on type I NKT cell activation. Although all glycolipids are bound by the T cell receptor of type I NKT cells in real time binding assays with high affinity, only a few activate type I NKT cells in in vivo or in vitro experiments. The differences in biological responses are likely a result of different pharmacokinetic properties of each lipid, which carry modifications at different parts of the molecule. Our results indicate a need to perform a variety of assays to ascertain the therapeutic potential of type I NKT cell GSL activators.

Indexed as

AnimalsAntigen PresentationAntigens, CD1dBinding SitesCell LineCrystallography, X-RayGalactosylceramidesGlycosphingolipidsHumansKineticsLymphocyte ActivationMiceMice, Inbred C57BLModels, MolecularMolecular StructureMultiprotein Complexesalpha-galactosylceramideAntigens, CD1dCD1d antigen, mouseCD1D protein, humanGalactosylceramidesGlycosphingolipidsMultiprotein ComplexesReceptors, Antigen, T-Cell, alpha-betacytokine inductionglycolipid structureimmunologyprotein crystallizationsurface plasmon resonance (SPR)T cell receptor (TCR)

Identifiers

PMID26018083
PMCPMC4498060
OpenAlexW1893857266

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.