Evidence map›Paper›PMID 26017307›Full record

ArticleNature2015

Interaction and signalling between a cosmopolitan phytoplankton and associated bacteria.

S A Amin, L R Hmelo, H M van Tol, B P Durham, L T Carlson, K R Heal, R L Morales, C T Berthiaume, M S Parker, B Djunaedi and 4 more

Abstract read
PubMed Publisher
In one paragraph

Article in Nature, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 430 papers.

0numbers the graph read from it
0cells of the map it votes in
430citing papers in PubMed
81.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

430 citing papers in PubMed, 1,096 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Large-Scale Microbiome Profiling of Brown Algae Identifies a SpecificJournal of microbiology and biotechnology · 2026
    Article
  9. Article
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  11. mBio · 2026
    Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Marine BacteriumJournal of natural products · 2026
    Article
  18. Article
  19. Article
  20. Article

370 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors at 2 institutions in 1 country.

S A Amin1] School of Oceanography, University of Washington, Seattle, Washington 98195, USA [2] Chemistry Faculty, New York University Abu Dhabi, PO Box 129188, Abu Dhabi, United Arab Emirates.
L R HmeloDepartment of Microbiology, University of Washington, Seattle, Washington 98195, USA.
H M van TolSchool of Oceanography, University of Washington, Seattle, Washington 98195, USA.
B P DurhamDepartment of Microbiology, University of Georgia, Athens, Georgia 30602, USA.
L T CarlsonSchool of Oceanography, University of Washington, Seattle, Washington 98195, USA.
K R HealSchool of Oceanography, University of Washington, Seattle, Washington 98195, USA.
R L MoralesSchool of Oceanography, University of Washington, Seattle, Washington 98195, USA.
C T BerthiaumeSchool of Oceanography, University of Washington, Seattle, Washington 98195, USA.
M S ParkerSchool of Oceanography, University of Washington, Seattle, Washington 98195, USA.
B DjunaediSchool of Oceanography, University of Washington, Seattle, Washington 98195, USA.
A E IngallsSchool of Oceanography, University of Washington, Seattle, Washington 98195, USA.
M R ParsekDepartment of Microbiology, University of Washington, Seattle, Washington 98195, USA.
M A MoranDepartment of Marine Science, University of Georgia, Athens, Georgia 30602, USA.
E V ArmbrustSchool of Oceanography, University of Washington, Seattle, Washington 98195, USA.
University of Washington · USUniversity of Georgia · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Interactions between primary producers and bacteria impact the physiology of both partners, alter the chemistry of their environment, and shape ecosystem diversity. In marine ecosystems, these interactions are difficult to study partly because the major photosynthetic organisms are microscopic, unicellular phytoplankton. Coastal phytoplankton communities are dominated by diatoms, which generate approximately 40% of marine primary production and form the base of many marine food webs. Diatoms co-occur with specific bacterial taxa, but the mechanisms of potential interactions are mostly unknown. Here we tease apart a bacterial consortium associated with a globally distributed diatom and find that a Sulfitobacter species promotes diatom cell division via secretion of the hormone indole-3-acetic acid, synthesized by the bacterium using both diatom-secreted and endogenous tryptophan. Indole-3-acetic acid and tryptophan serve as signalling molecules that are part of a complex exchange of nutrients, including diatom-excreted organosulfur molecules and bacterial-excreted ammonia. The potential prevalence of this mode of signalling in the oceans is corroborated by metabolite and metatranscriptome analyses that show widespread indole-3-acetic acid production by Sulfitobacter-related bacteria, particularly in coastal environments. Our study expands on the emerging recognition that marine microbial communities are part of tightly connected networks by providing evidence that these interactions are mediated through production and exchange of infochemicals.

Indexed as

EcosystemDiatomsIndoleacetic AcidsMetabolomicsMolecular Sequence DataOceans and SeasPhotosynthesisPhytoplanktonRhodobacteraceaeSeawaterTranscriptomeTryptophanindoleacetic acidIndoleacetic AcidsTryptophan

Identifiers

PMID26017307
OpenAlexW1779425862

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.