Evidence map›Paper›PMID 26017053›Full record

ArticlePloS one2015

A Taxonomic Revision of the Wallemia sebi Species Complex.

Sašo Jančič, Hai D T Nguyen, Jens C Frisvad, Polona Zalar, Hans-Josef Schroers, Keith A Seifert, Nina Gunde-Cimerman

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 57 citations in OpenAlex.

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  11. Molecular Tools for Detection and Identification ofJournal of fungi (Basel, Switzerland) · 2020
    Review
  12. Brazilian fungal diversity represented by DNA markers generated over 20 years.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2020
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. The GenusMicroorganisms · 2018
    Review
  19. Article
  20. A new family and genus inIMA fungus · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 3 countries.

Sašo JančičDepartment of Biology, Biotechnical Faculty, University of Ljubljana, Ljubljana, Slovenia.
Hai D T NguyenDepartment of Biology, Faculty of Science, University of Ottawa, Ottawa, Ontario, Canada.
Jens C FrisvadDepartment of Systems Biology, Technical University of Denmark, Lyngby, Denmark.
Polona ZalarDepartment of Biology, Biotechnical Faculty, University of Ljubljana, Ljubljana, Slovenia.
Hans-Josef SchroersAgricultural Institute of Slovenia, Ljubljana, Slovenia.
Keith A SeifertDepartment of Biology, Faculty of Science, University of Ottawa, Ottawa, Ontario, Canada; Biodiversity (Mycology), Eastern Cereal and Oilseed Research Centre, Agriculture and Agri-Food Canada, Ottawa, Ontario, Canada.
Nina Gunde-CimermanDepartment of Biology, Biotechnical Faculty, University of Ljubljana, Ljubljana, Slovenia; Centre of Excellence for Integrated Approaches in Chemistry and Biology of Proteins (CIPKeBiP), Ljubljana, Slovenia.
University of Ljubljana · SIUniversity of Ottawa · CAAgricultural institute of Slovenia · SITechnical University of Denmark · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Wallemia sebi is a xerophilic food- and air-borne fungus. The name has been used for strains that prevail in cold, temperate and tropical climates. In this study, multi-locus phylogenetic analyses, using the internal transcribed spacer (ITS) regions, DNA replication licensing factor (MCM7), pre-rRNA processing protein (TSR1), RNA polymerase II largest subunit (RPB1), RNA polymerase II second largest subunit (RPB2) and a new marker 3´-phosphoadenosine-5´-phosphatase (HAL2), confirmed the previous hypothesis that W. sebi presents a complex of at least four species. Here, we confirm and apply the phylogenetic analyses based species hypotheses from a companion study to guide phenotypic assessment of W. sebi like strains from a wide range of substrates, climates and continents allowed the recognition of W. sebi sensu stricto and three new species described as W. mellicola, W. Canadensis, and W. tropicalis. The species differ in their conidial size, xerotolerance, halotolerance, chaotolerance, growth temperature regimes, extracellular enzyme activity profiles, and secondary metabolite patterns. A key to all currently accepted Wallemia species is provided that allow their identification on the basis of physiological, micromorphological and culture characters.

Indexed as

PhylogenyAnimalsAscomycotaEcosystemEnzymesFungal ProteinsHumansLivestockMinichromosome Maintenance Complex Component 7NucleotidasesSecondary MetabolismSkinSpores, FungalEnzymesFungal ProteinsMinichromosome Maintenance Complex Component 7Nucleotidases

Identifiers

PMID26017053
PMCPMC4446336
OpenAlexW2207142442

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.