Evidence map›Paper›PMID 26016853›Full record

ArticlePLoS genetics2015

The Developmental Intestinal Regulator ELT-2 Controls p38-Dependent Immune Responses in Adult C. elegans.

Dena H S Block, Kwame Twumasi-Boateng, Hae Sung Kang, Jolie A Carlisle, Alexandru Hanganu, Ty Yu-Jen Lai, Michael Shapira

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
2.0field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 59 citations in OpenAlex.

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  13. Take a Walk to the Wild Side ofMicrobiology and molecular biology reviews : MMBR · 2021
    Review
  14. Review
  15. Innate immunity in C. elegans.Current topics in developmental biology · 2021
    Review
  16. Evolution of Developmental GATA Factors in Nematodes.Journal of developmental biology · 2020
    Article
  17. Article
  18. In the Model HostInternational journal of molecular sciences · 2020
    Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Dena H S BlockDepartment of Integrative Biology, University of California, Berkeley, Berkeley, California, United States of America.
Kwame Twumasi-BoatengDepartment of Integrative Biology, University of California, Berkeley, Berkeley, California, United States of America; Graduate Group in Microbiology, University of California Berkeley, Berkeley, California, United States of America.
Hae Sung KangDepartment of Integrative Biology, University of California, Berkeley, Berkeley, California, United States of America.
Jolie A CarlisleDepartment of Integrative Biology, University of California, Berkeley, Berkeley, California, United States of America.
Alexandru HanganuDepartment of Integrative Biology, University of California, Berkeley, Berkeley, California, United States of America.
Ty Yu-Jen LaiDepartment of Integrative Biology, University of California, Berkeley, Berkeley, California, United States of America.
Michael ShapiraDepartment of Integrative Biology, University of California, Berkeley, Berkeley, California, United States of America; Graduate Group in Microbiology, University of California Berkeley, Berkeley, California, United States of America.
University of California, Berkeley · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

GATA transcription factors play critical roles in cellular differentiation and development. However, their roles in mature tissues are less understood. In C. elegans larvae, the transcription factor ELT-2 regulates terminal differentiation of the intestine. It is also expressed in the adult intestine, where it was suggested to maintain intestinal structure and function, and where it was additionally shown to contribute to infection resistance. To study the function of elt-2 in adults we characterized elt-2-dependent gene expression following its knock-down specifically in adults. Microarray analysis identified two ELT-2-regulated gene subsets: one, enriched for hydrolytic enzymes, pointed at regulation of constitutive digestive functions as a dominant role of adult elt-2; the second was enriched for immune genes that are induced in response to Pseudomonas aeruginosa infection. Focusing on the latter, we used genetic analyses coupled to survival assays and quantitative RT-PCR to interrogate the mechanism(s) through which elt-2 contributes to immunity. We show that elt-2 controls p38-dependent gene induction, cooperating with two p38-activated transcription factors, ATF-7 and SKN-1. This demonstrates a mechanism through which the constitutively nuclear elt-2 can impact induced responses, and play a dominant role in C. elegans immunity.

Indexed as

Gene Expression RegulationActivating Transcription FactorsAnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsDNA-Binding ProteinsGATA Transcription FactorsGene Knockdown TechniquesImmunity, InnateIntestinal MucosaLarvap38 Mitogen-Activated Protein KinasesPromoter Regions, GeneticPseudomonas aeruginosaTranscription FactorsActivating Transcription FactorsATF-7 protein, C elegansCaenorhabditis elegans ProteinsDNA-Binding ProteinsELT-2 protein, C elegansGATA Transcription Factorsp38 Mitogen-Activated Protein Kinasesskn-1 protein, C elegansTranscription Factors

Identifiers

PMID26016853
PMCPMC4446034
OpenAlexW365514854

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.