Evidence map›Paper›PMID 26016476›Full record

ArticleBMC cancer2015

Compounds identified by virtual docking to a tetrameric EGFR extracellular domain can modulate Grb2 internalization.

Ursula D Ramirez, Anna S Nikonova, Hanqing Liu, Anna Pecherskaya, Sarah H Lawrence, Ilya G Serebriiskii, Yan Zhou, Matthew K Robinson, Margret B Einarson, Erica A Golemis and 1 more

Open access · goldAbstract read
In one paragraph

Article in BMC cancer, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

  1. Docking Screens for Novel Ligands Conferring New Biology.Journal of medicinal chemistry · 2016
    Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 2 countries.

Ursula D RamirezMolecular Therapeutics Program, Fox Chase Cancer Center, 333 Cottman Ave, Philadelphia, PA, 19111, USA. Ursula.Ramirez@fccc.edu.
Anna S NikonovaMolecular Therapeutics Program, Fox Chase Cancer Center, 333 Cottman Ave, Philadelphia, PA, 19111, USA. Anna.Nikonova@fccc.edu.
Hanqing LiuMolecular Therapeutics Program, Fox Chase Cancer Center, 333 Cottman Ave, Philadelphia, PA, 19111, USA. hanqing@ujs.edu.cn.
Anna PecherskayaTranslational Facility, Fox Chase Cancer Center, 333 Cottman Ave, Philadelphia, PA, 19111, USA. anna_pech@yahoo.com.
Sarah H LawrenceMolecular Therapeutics Program, Fox Chase Cancer Center, 333 Cottman Ave, Philadelphia, PA, 19111, USA. Sarah.Lawrence@fccc.edu.
Ilya G SerebriiskiiMolecular Therapeutics Program, Fox Chase Cancer Center, 333 Cottman Ave, Philadelphia, PA, 19111, USA. Ilya.Serebriiskii@fccc.edu.
Yan ZhouBiostatistics and Bioinformatics Facility, Fox Chase Cancer Center, 333 Cottman Ave, Philadelphia, PA, 19111, USA. Yan.Zhou@fccc.edu.
Matthew K RobinsonMolecular Therapeutics Program, Fox Chase Cancer Center, 333 Cottman Ave, Philadelphia, PA, 19111, USA. Matthew.Robinson@fccc.edu.
Margret B EinarsonTranslational Facility, Fox Chase Cancer Center, 333 Cottman Ave, Philadelphia, PA, 19111, USA. Margret.Einarson@fccc.edu.
Erica A GolemisMolecular Therapeutics Program, Fox Chase Cancer Center, 333 Cottman Ave, Philadelphia, PA, 19111, USA. Erica.Golemis@fccc.edu.
Eileen K JaffeMolecular Therapeutics Program, Fox Chase Cancer Center, 333 Cottman Ave, Philadelphia, PA, 19111, USA. Eileen.Jaffe@fccc.edu.
Fox Chase Cancer Center · US

Funding

WORD PROCESSING CENTER--COREP30CA006927 · NCI · RESEARCH INST OF FOX CHASE CAN CTR · PI Margaret von Mehren · 1985 to 2026
$138.8M
The Porphobilinogen Synthase FamilyR01ES003654 · NIEHS · UNIVERSITY OF PENNSYLVANIA · PI JAFFE, EILEEN K · 1985 to 2012
$3.9M
ROLES OF HEF1 IN CELL DIFFERENTIATION AND SURVIVALR01CA063366 · NCI · RESEARCH INST OF FOX CHASE CAN CTR · PI GOLEMIS, ERICA A. · 1998 to 2013
$3.9M
A Role for AMH Autocrine Signaling in NSCLCR21CA181287 · NCI · RESEARCH INST OF FOX CHASE CAN CTR · PI GOLEMIS, ERICA A. · 2014 to 2015
$421k
NCI NIH HHS P30 CA006927NCI NIH HHS R01 CA063366NCI NIH HHS R21 CA181287NIEHS NIH HHS R01 ES003654NIEHS NIH HHS R01 ES003654-27
6 · The paper itself

Abstract

backgroundOverexpression or mutation of the epidermal growth factor receptor (EGFR) potently enhances the growth of many solid tumors. Tumor cells frequently display resistance to mechanistically-distinct EGFR-directed therapeutic agents, making it valuable to develop therapeutics that work by additional mechanisms. Current EGFR-targeting therapeutics include antibodies targeting the extracellular domains, and small molecules inhibiting the intracellular kinase domain. Recent studies have identified a novel prone extracellular tetrameric EGFR configuration, which we identify as a potential target for drug discovery.

methodsOur focus is on the prone EGFR tetramer, which contains a novel protein-protein interface involving extracellular domain III. This EGFR tetramer is computationally targeted for stabilization by small molecule ligand binding. This study performed virtual screening of a Life Chemicals, Inc. small molecule library of 345,232 drug-like compounds against a molecular dynamics simulation of protein-protein interfaces distinct to the novel tetramer. One hundred nine chemically diverse candidate molecules were selected and evaluated using a cell-based high-content imaging screen that directly assessed induced internalization of the EGFR effector protein Grb2. Positive hits were further evaluated for influence on phosphorylation of EGFR and its effector ERK1/2.

resultsFourteen hit compounds affected internalization of Grb2, an adaptor responsive to EGFR activation. Most hits had limited effect on cell viability, and minimally influenced EGFR and ERK1/2 phosphorylation. Docked hit compound poses generally include Arg270 or neighboring residues, which are also involved in binding the effective therapeutic cetuximab, guiding further chemical optimization.

conclusionsThese data suggest that the EGFR tetrameric configuration offers a novel cancer drug target.

Indexed as

Carcinoma, Squamous CellCell Line, TumorCell SurvivalCetuximabDrug Evaluation, PreclinicalErbB ReceptorsErlotinib HydrochlorideGRB2 Adaptor ProteinHead and Neck NeoplasmsHumansMitogen-Activated Protein Kinase 1Mitogen-Activated Protein Kinase 3Molecular Docking SimulationMolecular Dynamics SimulationPhosphorylationProtein Interaction Domains and MotifsCetuximabErbB ReceptorsErlotinib HydrochlorideGRB2 Adaptor ProteinGRB2 protein, humanMitogen-Activated Protein Kinase 1Mitogen-Activated Protein Kinase 3Protein Kinase Inhibitors

Identifiers

PMID26016476
PMCPMC4451962
OpenAlexW1528532817

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.