Evidence map›Paper›PMID 26015446›Full record

ArticlePlant physiology2015

Homeologs of the Nicotiana benthamiana Antiviral ARGONAUTE1 Show Different Susceptibilities to microRNA168-Mediated Control.

Torsten Gursinsky, Walter Pirovano, Giorgio Gambino, Susann Friedrich, Sven-Erik Behrens, Vitantonio Pantaleo

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
4.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 3 countries.

Torsten GursinskyInstitute of Biochemistry and Biotechnology, Martin Luther University Halle-Wittenberg, D-06120 Halle/Saale, Germany (T.G., S.F., S.-E.B.);BaseClear, 233CC Leiden, The Netherlands (W.P.);Institute for Sustainable Plant Protection-Consiglio Nazionale delle Ricerche, Research Unit of Grugliasco, 10135 Turin, Italy (G.G.); and Institute for Sustainable Plant Protection-Consiglio Nazionale delle Ricerche, Research Unit of Bari, 70126 Bari, Italy (V.P.).
Walter PirovanoInstitute of Biochemistry and Biotechnology, Martin Luther University Halle-Wittenberg, D-06120 Halle/Saale, Germany (T.G., S.F., S.-E.B.);BaseClear, 233CC Leiden, The Netherlands (W.P.);Institute for Sustainable Plant Protection-Consiglio Nazionale delle Ricerche, Research Unit of Grugliasco, 10135 Turin, Italy (G.G.); and Institute for Sustainable Plant Protection-Consiglio Nazionale delle Ricerche, Research Unit of Bari, 70126 Bari, Italy (V.P.).ORCID http://orcid.org/0000-0002-2717-4735
Giorgio GambinoInstitute of Biochemistry and Biotechnology, Martin Luther University Halle-Wittenberg, D-06120 Halle/Saale, Germany (T.G., S.F., S.-E.B.);BaseClear, 233CC Leiden, The Netherlands (W.P.);Institute for Sustainable Plant Protection-Consiglio Nazionale delle Ricerche, Research Unit of Grugliasco, 10135 Turin, Italy (G.G.); and Institute for Sustainable Plant Protection-Consiglio Nazionale delle Ricerche, Research Unit of Bari, 70126 Bari, Italy (V.P.).
Susann FriedrichInstitute of Biochemistry and Biotechnology, Martin Luther University Halle-Wittenberg, D-06120 Halle/Saale, Germany (T.G., S.F., S.-E.B.);BaseClear, 233CC Leiden, The Netherlands (W.P.);Institute for Sustainable Plant Protection-Consiglio Nazionale delle Ricerche, Research Unit of Grugliasco, 10135 Turin, Italy (G.G.); and Institute for Sustainable Plant Protection-Consiglio Nazionale delle Ricerche, Research Unit of Bari, 70126 Bari, Italy (V.P.).
Sven-Erik BehrensInstitute of Biochemistry and Biotechnology, Martin Luther University Halle-Wittenberg, D-06120 Halle/Saale, Germany (T.G., S.F., S.-E.B.);BaseClear, 233CC Leiden, The Netherlands (W.P.);Institute for Sustainable Plant Protection-Consiglio Nazionale delle Ricerche, Research Unit of Grugliasco, 10135 Turin, Italy (G.G.); and Institute for Sustainable Plant Protection-Consiglio Nazionale delle Ricerche, Research Unit of Bari, 70126 Bari, Italy (V.P.).
Vitantonio PantaleoInstitute of Biochemistry and Biotechnology, Martin Luther University Halle-Wittenberg, D-06120 Halle/Saale, Germany (T.G., S.F., S.-E.B.);BaseClear, 233CC Leiden, The Netherlands (W.P.);Institute for Sustainable Plant Protection-Consiglio Nazionale delle Ricerche, Research Unit of Grugliasco, 10135 Turin, Italy (G.G.); and Institute for Sustainable Plant Protection-Consiglio Nazionale delle Ricerche, Research Unit of Bari, 70126 Bari, Italy (V.P.) vitantonio.pantaleo@cnr.it.ORCID http://orcid.org/0000-0001-6677-6504
Institute for Sustainable Plant Protection · ITMartin Luther University Halle-Wittenberg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The plant ARGONAUTE1 protein (AGO1) is a central functional component of the posttranscriptional regulation of gene expression and the RNA silencing-based antiviral defense. By genomic and molecular approaches, we here reveal the presence of two homeologs of the AGO1-like gene in Nicotiana benthamiana, NbAGO1-1H and NbAGO1-1L. Both homeologs retain the capacity to transcribe messenger RNAs (mRNAs), which mainly differ in one 18-nucleotide insertion/deletion (indel). The indel does not modify the frame of the open reading frame, and it is located eight nucleotides upstream of the target site of a microRNA, miR168, which is an important modulator of AGO1 expression. We demonstrate that there is a differential accumulation of the two NbAGO1-1 homeolog mRNAs at conditions where miR168 is up-regulated, such as during a tombusvirus infection. The data reported suggest that the indel affects the miR168-guided regulation of NbAGO1 mRNA. The two AGO1 homeologs show full functionality in reconstituted, catalytically active RNA-induced silencing complexes following the incorporation of small interfering RNAs. Virus-induced gene silencing experiments suggest a specific involvement of the NbAGO1 homeologs in symptom development. The results provide an example of the diversity of microRNA target regions in NbAGO1 homeolog genes, which has important implications for improving resilience measures of the plant during viral infections.

Indexed as

Sequence Homology, Amino AcidAmino Acid SequenceAntiviral AgentsArgonaute ProteinsBase SequenceBiocatalysisGene Expression Regulation, PlantGene SilencingGenes, PlantGenes, ReporterGenetic LociGenetic VariationGenome, PlantGreen Fluorescent ProteinsINDEL MutationMicroRNAsAntiviral AgentsArgonaute ProteinsGreen Fluorescent ProteinsMicroRNAsPlant ProteinsRNA, Messenger

Identifiers

PMID26015446
PMCPMC4741319
OpenAlexW1812883636

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.