Evidence map›Paper›PMID 26014799›Full record

ArticleThe Journal of infectious diseases2015

Biomarkers for Tuberculosis Based on Secreted, Species-Specific, Bacterial Small Molecules.

Shih-Jung Pan, Asa Tapley, John Adamson, Tessa Little, Michael Urbanowski, Keira Cohen, Alexander Pym, Deepak Almeida, Afton Dorasamy, Emilie Layre and 8 more

Abstract read
In one paragraph

Article in The Journal of infectious diseases, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Article
  6. Article
  7. Review
  8. Review
  9. Review
  10. Recent developments in siderotyping: procedure and application.World journal of microbiology & biotechnology · 2020
    Review
  11. Lipid phenotyping of lung epithelial lining fluid in healthy human volunteers.Metabolomics : Official journal of the Metabolomic Society · 2018
    Article
  12. Review
  13. Siderophores for molecular imaging applications.Clinical and translational imaging · 2017
    Review
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 7 institutions in 4 countries.

Shih-Jung PanKwaZulu-Natal Research Institute for Tuberculosis and HIV (K-RITH), Nelson R. Mandela School of Medicine, University of KwaZulu-Natal, Durban, South Africa Center for Tuberculosis Research, Johns Hopkins University School of Medicine, Baltimore, Maryland.
Asa TapleyKwaZulu-Natal Research Institute for Tuberculosis and HIV (K-RITH), Nelson R. Mandela School of Medicine, University of KwaZulu-Natal, Durban, South Africa San Francisco School of Medicine, University of California, Oakland Howard Hughes Medical Institute, Chevy Chase, Maryland.
John AdamsonKwaZulu-Natal Research Institute for Tuberculosis and HIV (K-RITH), Nelson R. Mandela School of Medicine, University of KwaZulu-Natal, Durban, South Africa.
Tessa LittleSchool of Laboratory Medicine and Medical Sciences, University of KwaZulu-Natal, Durban, South Africa.
Michael UrbanowskiCenter for Tuberculosis Research, Johns Hopkins University School of Medicine, Baltimore, Maryland.
Keira CohenKwaZulu-Natal Research Institute for Tuberculosis and HIV (K-RITH), Nelson R. Mandela School of Medicine, University of KwaZulu-Natal, Durban, South Africa Division of Pulmonary and Critical Care Medicine, Department of Medicine.
Alexander PymKwaZulu-Natal Research Institute for Tuberculosis and HIV (K-RITH), Nelson R. Mandela School of Medicine, University of KwaZulu-Natal, Durban, South Africa.
Deepak AlmeidaCenter for Tuberculosis Research, Johns Hopkins University School of Medicine, Baltimore, Maryland.
Afton DorasamyKwaZulu-Natal Research Institute for Tuberculosis and HIV (K-RITH), Nelson R. Mandela School of Medicine, University of KwaZulu-Natal, Durban, South Africa.
Emilie LayreDivision of Rheumatology, Immunology and Allergy, Brigham and Women's Hospital, Harvard Medical School, Boston, Massachusetts.
David C YoungDivision of Rheumatology, Immunology and Allergy, Brigham and Women's Hospital, Harvard Medical School, Boston, Massachusetts.
Ravesh SinghHIV Pathogenesis Programme, Doris Duke Medical Research Institute, Nelson R. Mandela School of Medicine.
Vinod B PatelDepartment of Neurology, University of KwaZulu Natal.
Kristina WallengrenTuberculosis & HIV Investigative Network in KwaZulu-Natal (THINK), Durban, South Africa.
Thumbi Ndung'uKwaZulu-Natal Research Institute for Tuberculosis and HIV (K-RITH), Nelson R. Mandela School of Medicine, University of KwaZulu-Natal, Durban, South Africa HIV Pathogenesis Programme, Doris Duke Medical Research Institute, Nelson R. Mandela School of Medicine Max Planck Institute for Infection Biology, Berlin, Germany Ragon Institute of Massachusetts General Hospital, Massachusetts Institute of Technology and Harvard University, Cambridge.
Douglas WilsonDepartment of Medicine, Edendale Hospital, University of KwaZulu-Natal, Pietermaritzburg, South Africa.
D Branch MoodyDivision of Rheumatology, Immunology and Allergy, Brigham and Women's Hospital, Harvard Medical School, Boston, Massachusetts.
William BishaiCenter for Tuberculosis Research, Johns Hopkins University School of Medicine, Baltimore, Maryland Howard Hughes Medical Institute, Chevy Chase, Maryland.
University of KwaZulu-Natal · ZABrigham and Women's Hospital · USJohns Hopkins University · USHarvard University · USHoward Hughes Medical Institute · USMax Planck Institute for Infection Biology · DEMedical Research Institute · LK

Funding

Metabolomics Core U19AI111224 · NIAID · BRIGHAM AND WOMEN'S HOSPITAL · PI MOODY, DAVID BRANCH, MURRAY, MEGAN B · 2015 to 2021
$20.4M
Biomarkers and Signaling in TuberculosisR01AI097138 · NIAID · JOHNS HOPKINS UNIVERSITY · PI BISHAI, WILLIAM RAMSES · 2011 to 2014
$2.4M
Role of Tuberculosinyl Metabolites in M. Tuberculosis VirulenceR01AI116604 · NIAID · BRIGHAM AND WOMEN'S HOSPITAL · PI MOODY, DAVID BRANCH · 2015 to 2019
$2.4M
Howard Hughes Medical InstituteNIAID NIH HHS AI097138NIAID NIH HHS R01 AI097138NIAID NIH HHS R01 AI116604NIAID NIH HHS U19 AI111224
6 · The paper itself

Abstract

Improved biomarkers are needed for tuberculosis. To develop tests based on products secreted by tubercle bacilli that are strictly associated with viability, we evaluated 3 bacterial-derived, species-specific, small molecules as biomarkers: 2 mycobactin siderophores and tuberculosinyladenosine. Using liquid chromatography-tandem mass spectrometry, we demonstrated the presence of 1 or both mycobactins and/or tuberculosinyladenosine in serum and whole lung tissues from infected mice and sputum, cerebrospinal fluid (CSF), or lymph nodes from infected patients but not uninfected controls. Detection of the target molecules distinguished host infection status in 100% of mice with both serum and lung as the target sample. In human subjects, we evaluated detection of the bacterial small molecules (BSMs) in multiple body compartments in 3 patient cohorts corresponding to different forms of tuberculosis. We detected at least 1 of the 3 molecules in 90%, 71%, and 40% of tuberculosis patients' sputum, CSF, and lymph node samples, respectively. In paucibacillary forms of human tuberculosis, which are difficult to diagnose even with culture, detection of 1 or more BSM was rapid and compared favorably to polymerase chain reaction-based detection. Secreted BSMs, detectable in serum, warrant further investigation as a means for diagnosis and therapeutic monitoring in patients with tuberculosis.

Indexed as

AdenosineAnimalsBacterial Typing TechniquesBiomarkersChromatography, LiquidHumansLungMiceMycobacterium tuberculosisOxazolesSputumTandem Mass SpectrometryTuberculosisAdenosineBiomarkersmycobactinsOxazolesbiomarkerdiagnosticmycobactinsmall moleculetuberculosinyladenosinetuberculosis

Identifiers

PMID26014799
PMCPMC4633767
OpenAlexW1886953352

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.