Evidence map›Paper›PMID 26014426›Full record

ArticleEuropean journal of human genetics : EJHG2016

Genome-wide association study with 1000 genomes imputation identifies signals for nine sex hormone-related phenotypes.

Katherine S Ruth, Purdey J Campbell, Shelby Chew, Ee Mun Lim, Narelle Hadlow, Bronwyn G A Stuckey, Suzanne J Brown, Bjarke Feenstra, John Joseph, Gabriela L Surdulescu and 6 more

Open access · hybridAbstract read
In one paragraph

Article in European journal of human genetics : EJHG, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 67 papers, 8 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
67citing papers in PubMed, 8 pooled it
6.0field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

67 citing papers in PubMed, 8 syntheses or guidelines pooled it, 133 citations in OpenAlex.

  1. Pooled it
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  9. Genetic Variation in Steroid and Xenobiotic Metabolizing Pathways and Enterolactone Excretion Before and After Flaxseed Intervention in African American and European American Women.Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2019
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  19. Shared Pathophysiological Mechanisms and Genetic Factors in Early Menarche and Polycystic Ovary Syndrome.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2025
    Review
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7 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 7 institutions in 4 countries.

Katherine S RuthGenetics of Complex Traits, University of Exeter Medical School, University of Exeter, Exeter, UK.
Purdey J CampbellEndocrinology and Diabetes, Sir Charles Gairdner Hospital, Nedlands, Australia.
Shelby ChewEndocrinology and Diabetes, Sir Charles Gairdner Hospital, Nedlands, Australia.
Ee Mun LimEndocrinology and Diabetes, Sir Charles Gairdner Hospital, Nedlands, Australia.
Narelle HadlowEndocrinology and Diabetes, Sir Charles Gairdner Hospital, Nedlands, Australia.
Bronwyn G A StuckeyEndocrinology and Diabetes, Sir Charles Gairdner Hospital, Nedlands, Australia.
Suzanne J BrownEndocrinology and Diabetes, Sir Charles Gairdner Hospital, Nedlands, Australia.
Bjarke FeenstraDepartment of Epidemiology Research, Statens Serum Institut, Copenhagen, Denmark.ORCID http://orcid.org/0000-0003-1478-649X
John JosephPathwest Laboratory Medicine WA, Nedlands, Australia.
Gabriela L SurdulescuDepartment of Twin Research and Genetic Epidemiology, King's College London, London, UK.
Hou Feng ZhengDepartment of Medicine, Human Genetics, McGill University, Montreal, Canada.
J Brent RichardsDepartment of Twin Research and Genetic Epidemiology, King's College London, London, UK.
Anna MurrayGenetics of Complex Traits, University of Exeter Medical School, University of Exeter, Exeter, UK.
Tim D SpectorDepartment of Twin Research and Genetic Epidemiology, King's College London, London, UK.
Scott G WilsonEndocrinology and Diabetes, Sir Charles Gairdner Hospital, Nedlands, Australia.
John R B PerryGenetics of Complex Traits, University of Exeter Medical School, University of Exeter, Exeter, UK.
Sir Charles Gairdner Hospital · AUKing's College London · GBThe University of Western Australia · AUUniversity of Exeter · GBMcGill University · CAPathwest Laboratory Medicine · AUStatens Serum Institut · DK

Funding

CIHRMedical Research Council MC_U106179472Medical Research Council MC_UU_12015/2Wellcome TrustWellcome Trust 092447/Z/10/Z
6 · The paper itself

Abstract

Genetic factors contribute strongly to sex hormone levels, yet knowledge of the regulatory mechanisms remains incomplete. Genome-wide association studies (GWAS) have identified only a small number of loci associated with sex hormone levels, with several reproductive hormones yet to be assessed. The aim of the study was to identify novel genetic variants contributing to the regulation of sex hormones. We performed GWAS using genotypes imputed from the 1000 Genomes reference panel. The study used genotype and phenotype data from a UK twin register. We included 2913 individuals (up to 294 males) from the Twins UK study, excluding individuals receiving hormone treatment. Phenotypes were standardised for age, sex, BMI, stage of menstrual cycle and menopausal status. We tested 7,879,351 autosomal SNPs for association with levels of dehydroepiandrosterone sulphate (DHEAS), oestradiol, free androgen index (FAI), follicle-stimulating hormone (FSH), luteinizing hormone (LH), prolactin, progesterone, sex hormone-binding globulin and testosterone. Eight independent genetic variants reached genome-wide significance (P<5 × 10(-8)), with minor allele frequencies of 1.3-23.9%. Novel signals included variants for progesterone (P=7.68 × 10(-12)), oestradiol (P=1.63 × 10(-8)) and FAI (P=1.50 × 10(-8)). A genetic variant near the FSHB gene was identified which influenced both FSH (P=1.74 × 10(-8)) and LH (P=3.94 × 10(-9)) levels. A separate locus on chromosome 7 was associated with both DHEAS (P=1.82 × 10(-14)) and progesterone (P=6.09 × 10(-14)). This study highlights loci that are relevant to reproductive function and suggests overlap in the genetic basis of hormone regulation.

Indexed as

Dehydroepiandrosterone SulfateEstradiolFemaleFollicle Stimulating HormoneGenome, HumanGenome-Wide Association StudyGenotypeGonadal Steroid HormonesHumansLuteinizing HormoneMalePhenotypePolymorphism, Single NucleotideProgesteroneProlactinSex Hormone-Binding GlobulinDehydroepiandrosterone SulfateEstradiolFollicle Stimulating HormoneGonadal Steroid HormonesLuteinizing HormoneProgesteroneProlactinSex Hormone-Binding GlobulinTestosterone

Identifiers

PMID26014426
PMCPMC4564946
OpenAlexW1543017846

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.