Evidence map›Paper›PMID 26013259›Full record

ArticleMolecules and cells2015

Structure of the tripartite multidrug efflux pump AcrAB-TolC suggests an alternative assembly mode.

Jin-Sik Kim, Hyeongseop Jeong, Saemee Song, Hye-Yeon Kim, Kangseok Lee, Jaekyung Hyun, Nam-Chul Ha

Abstract read
In one paragraph

Article in Molecules and cells, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Jin-Sik KimDepartment of Manufacturing Pharmacy, Pusan National University, Busan 609-735, Korea.
Hyeongseop JeongDivision of Electron Microscopic Research, Korea Basic Science Institute, Dajeon 169-148, Korea.
Saemee SongDepartment of Food and Animal Biotechnology, Department of Agricultural Biotechnology, Center for Food and Bioconvergence, Research Institute for Agricultural and Life Sciences, Seoul National University, Seoul 151-742, Korea.
Hye-Yeon KimDivision of Magnetic Resonance, Korea Basic Science Institute, Chungbuk 363-883, Korea.
Kangseok LeeDepartment of Life Science, Chung-Ang University, Seoul 156-756, Korea.
Jaekyung HyunDivision of Electron Microscopic Research, Korea Basic Science Institute, Dajeon 169-148, Korea.
Nam-Chul HaDepartment of Food and Animal Biotechnology, Department of Agricultural Biotechnology, Center for Food and Bioconvergence, Research Institute for Agricultural and Life Sciences, Seoul National University, Seoul 151-742, Korea.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Escherichia coli AcrAB-TolC is a multidrug efflux pump that expels a wide range of toxic substrates. The dynamic nature of the binding or low affinity between the components has impeded elucidation of how the three components assemble in the functional state. Here, we created fusion proteins composed of AcrB, a transmembrane linker, and two copies of AcrA. The fusion protein exhibited acridine pumping activity, suggesting that the protein reflects the functional structure in vivo. To discern the assembling mode with TolC, the AcrBA fusion protein was incubated with TolC or a chimeric protein containing the TolC aperture tip region. Three-dimensional structures of the complex proteins were determined through transmission electron microscopy. The overall structure exemplifies the adaptor bridging model, wherein the funnel-like AcrA hexamer forms an intermeshing cogwheel interaction with the α-barrel tip region of TolC, and a direct interaction between AcrB and TolC is not allowed. These observations provide a structural blueprint for understanding multidrug resistance in pathogenic Gram-negative bacteria.

Indexed as

ATP-Binding Cassette, Sub-Family C ProteinsBacterial Outer Membrane ProteinsCatalytic DomainEscherichia coliEscherichia coli ProteinsLipoproteinsMembrane Transport ProteinsMicroscopy, Electron, TransmissionModels, MolecularMolecular Docking SimulationProtein BindingProtein MultimerizationProtein Structure, SecondaryRecombinant Fusion ProteinsAcrA protein, E coliAcrB protein, E coliATP-Binding Cassette, Sub-Family C ProteinsBacterial Outer Membrane ProteinsEscherichia coli ProteinsLipoproteinsMembrane Transport ProteinsRecombinant Fusion ProteinstolC protein, E colicomplex structureelectron microscopymembrane proteinmultidrug efflux pump

Identifiers

PMID26013259
PMCPMC4332038

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.