Evidence map›Paper›PMID 26013145›Full record

ArticleFunctional & integrative genomics2015

Differential expression of four soybean bZIP genes during Phakopsora pachyrhizi infection.

Murilo S Alves, Zamira G Soares, Pedro M P Vidigal, Everaldo G Barros, Adriana M P Poddanosqui, Luciano N Aoyagi, Ricardo V Abdelnoor, Francismar C Marcelino-Guimarães, Luciano G Fietto

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In one paragraph

Article in Functional & integrative genomics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
0.8field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Defensive Resistance of CowpeaPlants (Basel, Switzerland) · 2023
    Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. Review
  10. Genomics of Plant Disease Resistance in Legumes.Frontiers in plant science · 2019
    Review
  11. Article
  12. Fighting Asian Soybean Rust.Frontiers in plant science · 2016
    Review
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Murilo S AlvesDepartamento de Bioquímica e Biologia Molecular, Universidade Federal de Viçosa, Viçosa, Minas Gerais, 36570-000, Brazil.
Zamira G SoaresDepartamento de Bioquímica e Biologia Molecular, Universidade Federal de Viçosa, Viçosa, Minas Gerais, 36570-000, Brazil.
Pedro M P VidigalNúcleo de Análise de Biomoléculas, NuBioMol, Universidade Federal de Viçosa, Viçosa, Minas Gerais, 36570-000, Brazil.
Everaldo G BarrosUniversidade Católica de Brasília, 70790-160, Brasília, Distrito Federal, Brazil.
Adriana M P PoddanosquiEmbrapa Soja, Londrina, Paraná, 86001-970, Brazil.
Luciano N AoyagiEmbrapa Soja, Londrina, Paraná, 86001-970, Brazil.
Ricardo V AbdelnoorEmbrapa Soja, Londrina, Paraná, 86001-970, Brazil.
Francismar C Marcelino-GuimarãesEmbrapa Soja, Londrina, Paraná, 86001-970, Brazil.
Luciano G FiettoDepartamento de Bioquímica e Biologia Molecular, Universidade Federal de Viçosa, Viçosa, Minas Gerais, 36570-000, Brazil. lgfietto@ufv.br.
Brazilian Agricultural Research Corporation · BRUniversidade Federal de Viçosa · BRUniversidade Católica de Brasília · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Asian soybean rust (ASR), caused by the obligate biotrophic fungus Phakopsora pachyrhizi, is one of most important diseases in the soybean (Glycine max (L.) Merr.) agribusiness. The identification and characterization of genes related to plant defense responses to fungal infection are essential to develop ASR-resistant plants. In this work, we describe four soybean genes, GmbZIP62, GmbZIP105, GmbZIPE1, and GmbZIPE2, which encode transcription factors containing a basic leucine zipper (bZIP) domain from two divergent classes, and that are responsive to P. pachyrhizi infection. Molecular phylogenetic analyses demonstrated that these genes encode proteins similar to bZIP factors responsive to pathogens. Yeast transactivation assays showed that only GmbZIP62 has strong transactivation activity in yeast. In addition, three of the bZIP transcription factors analyzed were also differentially expressed by plant defense hormones, and all were differentially expressed by fungal attack, indicating that these proteins might participate in response to ASR infection. The results suggested that these bZIP proteins are part of the plant defense response to P. pachyrhizi infection, by regulating the gene expression related to ASR infection responses. These bZIP genes are potential targets to obtain new soybean genotypes resistant to ASR.

Indexed as

Gene Expression Regulation, PlantGlycine maxPhakopsora pachyrhiziPlant ProteinsTranscription FactorsZinc FingersPlant ProteinsTranscription FactorsAsian soybean rustBiotic stressPlant defenseSignal transductionTranscriptional control

Identifiers

PMID26013145
OpenAlexW2187758452

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.