Evidence map›Paper›PMID 26012881›Full record

ArticleBiometrics2015

Multiple testing for neuroimaging via hidden Markov random field.

Hai Shu, Bin Nan, Robert Koeppe

Abstract read
In one paragraph

Article in Biometrics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. DART: Distance Assisted Recursive Testing.Journal of machine learning research : JMLR · 2023
    Article
  4. Article
  5. Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Hai ShuDepartment of Biostatistics, University of Michigan, Ann Arbor, Michigan 48109, U.S.A.
Bin NanDepartment of Biostatistics, University of Michigan, Ann Arbor, Michigan 48109, U.S.A.
Robert KoeppeDepartment of Radiology, University of Michigan, Ann Arbor, Michigan 48109, U.S.A.

Funding

Alzheimer's Disease Neuroimaging Initiative - SupplementU01AG024904 · NIA · NORTHERN CALIFORNIA INSTITUTE RES &EDUC · PI WEINER, MICHAEL W · 2004 to 2015
$121.0M
High-Dimensional Data Issues in Aging ResearchR01AG036802 · NIA · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI NAN, BIN · 2010 to 2013
$1.1M
NIA NIH HHS R01 AG036802NIA NIH HHS R01-AG036802NIA NIH HHS U01 AG024904NIA NIH HHS U01-AG024904
6 · The paper itself

Abstract

Traditional voxel-level multiple testing procedures in neuroimaging, mostly p-value based, often ignore the spatial correlations among neighboring voxels and thus suffer from substantial loss of power. We extend the local-significance-index based procedure originally developed for the hidden Markov chain models, which aims to minimize the false nondiscovery rate subject to a constraint on the false discovery rate, to three-dimensional neuroimaging data using a hidden Markov random field model. A generalized expectation-maximization algorithm for maximizing the penalized likelihood is proposed for estimating the model parameters. Extensive simulations show that the proposed approach is more powerful than conventional false discovery rate procedures. We apply the method to the comparison between mild cognitive impairment, a disease status with increased risk of developing Alzheimer's or another dementia, and normal controls in the FDG-PET imaging study of the Alzheimer's Disease Neuroimaging Initiative.

Indexed as

Markov ChainsModels, StatisticalAlgorithmsAlzheimer DiseaseCognitive DysfunctionComputer SimulationFluorodeoxyglucose F18HumansImage Interpretation, Computer-AssistedImaging, Three-DimensionalNeuroimagingPositron-Emission TomographyRadiopharmaceuticalsReproducibility of ResultsSensitivity and SpecificityFluorodeoxyglucose F18RadiopharmaceuticalsAlzheimer's diseaseFalse discovery rateGeneralized expectation-maximization algorithmIsing modelLocal significance indexPenalized likelihood

Identifiers

PMID26012881
PMCPMC4579542

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.