Evidence map›Paper›PMID 26012552›Full record

ArticleMolecular and cellular biology2015

The Lineage-Specific Transcription Factor PU.1 Prevents Polycomb-Mediated Heterochromatin Formation at Macrophage-Specific Genes.

Mohita Tagore, Michael J McAndrew, Alison Gjidoda, Monique Floer

Open access · bronzeAbstract read
In one paragraph

Article in Molecular and cellular biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 13 citations in OpenAlex.

  1. Review
  2. Article
  3. ETS Transcription Factors in Immune Cells and Immune-Related Diseases.International journal of molecular sciences · 2024
    Review
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Mohita TagoreGenetics Graduate Program, Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan, USA.
Michael J McAndrewGenetics Graduate Program, Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan, USA.
Alison GjidodaGenetics Graduate Program, Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan, USA.
Monique FloerGenetics Graduate Program, Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan, USA floer@msu.edu.
Michigan State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Lineage-specific transcription factors (TFs) are important determinants of cellular identity, but their exact mode of action has remained unclear. Here we show using a macrophage differentiation system that the lineage-specific TF PU.1 keeps macrophage-specific genes accessible during differentiation by preventing Polycomb repressive complex 2 (PRC2) binding to transcriptional regulatory elements. We demonstrate that the distal enhancer of a gene becomes bound by PRC2 as cells differentiate in the absence of PU.1 binding and that the gene is wrapped into heterochromatin, which is characterized by increased nucleosome occupancy and H3K27 trimethylation. This renders the gene inaccessible to the transcriptional machinery and prevents induction of the gene in response to an external signal in mature cells. In contrast, if PU.1 is bound at the transcriptional regulatory region of a gene during differentiation, PRC2 is not recruited, nucleosome occupancy is kept low, and the gene can be induced in mature macrophages. Similar results were obtained at the enhancers of other macrophage-specific genes that fail to bind PU.1 as an estrogen receptor fusion (PUER) in this system. These results show that one role of PU.1 is to exclude PRC2 and to prevent heterochromatin formation at macrophage-specific genes.

Indexed as

AnimalsCell DifferentiationCell LineFemaleHeterochromatinHistonesInterleukin-12 Subunit p40Interleukin-1alphaLipopolysaccharidesMacrophagesMethylationMiceMice, Inbred BALB CNucleosomesPluripotent Stem CellsPolycomb Repressive Complex 2HeterochromatinHistonesInterleukin-12 Subunit p40Interleukin-1alphaLipopolysaccharidesNucleosomesPolycomb Repressive Complex 2Proto-Oncogene ProteinsProto-Oncogene Protein Spi-1Receptors, EstrogenRecombinant Fusion ProteinsRNA, Small InterferingTamoxifenTrans-Activators

Identifiers

PMID26012552
PMCPMC4524115
OpenAlexW2108139881

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.