Evidence map›Paper›PMID 26010953›Full record

Trial reportPloS one2015

Increased missense mutation burden of Fatty Acid metabolism related genes in nunavik inuit population.

Sirui Zhou, Lan Xiong, Pingxing Xie, Amirthagowri Ambalavanan, Cynthia V Bourassa, Alexandre Dionne-Laporte, Dan Spiegelman, Maude Turcotte Gauthier, Edouard Henrion, Ousmane Diallo and 2 more

Open access · goldAbstract readClinical TrialMulticenter Study
In one paragraph

Trial report in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed, 1 pooled it
1.5field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 1 synthesis or guideline pooled it, 23 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Review
  5. Association of theFrontiers in pediatrics · 2021
    Article
  6. Genetic architecture and adaptations of Nunavik Inuit.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Sirui ZhouMontreal Neurological Institute and Hospital, McGill University, Montréal (Que), Canada; Département de médecine, Faculté de médecine, Université de Montréal, Montréal (Que), Canada.
Lan XiongDépartement de psychiatrie, Faculté de médecine, Université de Montréal, Montréal (Que), Canada; Centre de recherche, Institut universitaire en santé mentale de Montréal (Que), Canada.
Pingxing XieMontreal Neurological Institute and Hospital, McGill University, Montréal (Que), Canada; Department of Human Genetics, McGill University, Montréal (Que), Canada.
Amirthagowri AmbalavananMontreal Neurological Institute and Hospital, McGill University, Montréal (Que), Canada; Department of Human Genetics, McGill University, Montréal (Que), Canada.
Cynthia V BourassaMontreal Neurological Institute and Hospital, McGill University, Montréal (Que), Canada.
Alexandre Dionne-LaporteMontreal Neurological Institute and Hospital, McGill University, Montréal (Que), Canada.
Dan SpiegelmanMontreal Neurological Institute and Hospital, McGill University, Montréal (Que), Canada.
Maude Turcotte GauthierMontreal Neurological Institute and Hospital, McGill University, Montréal (Que), Canada.
Edouard HenrionMontreal Neurological Institute and Hospital, McGill University, Montréal (Que), Canada.
Ousmane DialloMontreal Neurological Institute and Hospital, McGill University, Montréal (Que), Canada.
Patrick A DionMontreal Neurological Institute and Hospital, McGill University, Montréal (Que), Canada; Department of Neurology and Neurosurgery, McGill University, Montréal (Que), Canada.
Guy A RouleauMontreal Neurological Institute and Hospital, McGill University, Montréal (Que), Canada; Department of Neurology and Neurosurgery, McGill University, Montréal (Que), Canada.
McGill University · CAMontreal Neurological Institute and Hospital · CAUniversité de Montréal · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundNunavik Inuit (northern Quebec, Canada) reside along the arctic coastline where for generations their daily energy intake has mainly been derived from animal fat. Given this particular diet it has been hypothesized that natural selection would lead to population specific allele frequency differences and unique variants in genes related to fatty acid metabolism. A group of genes, namely CPT1A, CPT1B, CPT1C, CPT2, CRAT and CROT, encode for three carnitine acyltransferases that are important for the oxidation of fatty acids, a critical step in their metabolism.

methodsExome sequencing and SNP array genotyping were used to examine the genetic variations in the six genes encoding for the carnitine acyltransferases in 113 Nunavik Inuit individuals.

resultsAltogether ten missense variants were found in genes CPT1A, CPT1B, CPT1C, CPT2 and CRAT, including three novel variants and one Inuit specific variant CPT1A p.P479L (rs80356779). The latter has the highest frequency (0.955) compared to other Inuit populations. We found that by comparison to Asians or Europeans, the Nunavik Inuit have an increased mutation burden in CPT1A, CPT2 and CRAT; there is also a high level of population differentiation based on carnitine acyltransferase gene variations between Nunavik Inuit and Asians.

conclusionThe increased number and frequency of deleterious variants in these fatty acid metabolism genes in Nunavik Inuit may be the result of genetic adaptation to their diet and/or the extremely cold climate. In addition, the identification of these variants may help to understand some of the specific health risks of Nunavik Inuit.

Indexed as

ExomeMutation, MissensePolymorphism, Single NucleotideCarnitine AcyltransferasesDietary FatsFatty AcidsFemaleHumansInuitMaleMiddle AgedOxidation-ReductionQuebecCarnitine AcyltransferasesDietary FatsFatty Acids

Identifiers

PMID26010953
PMCPMC4444093
OpenAlexW1906826638

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.