Evidence map›Paper›PMID 26010918›Full record

ArticlePloS one2015

TaLHY, a 1R-MYB Transcription Factor, Plays an Important Role in Disease Resistance against Stripe Rust Fungus and Ear Heading in Wheat.

Zijin Zhang, Jieming Chen, Yongying Su, Hanmei Liu, Yanger Chen, Peigao Luo, Xiaogang Du, Dan Wang, Huaiyu Zhang

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed, 1 pooled it
6.2field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 1 synthesis or guideline pooled it, 61 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Identification of the causal mutation in early heading mutant of bread wheat (Molecular breeding : new strategies in plant improvement · 2024
    Article
  5. Article
  6. Review
  7. Article
  8. A R2R3 MYB Transcription Factor,International journal of molecular sciences · 2022
    Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Effectors ofInternational journal of molecular sciences · 2021
    Article
  15. Article
  16. Article
  17. Genome-Wide Analysis of the MYB Transcription Factor Superfamily inInternational journal of molecular sciences · 2020
    Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Zijin ZhangBiophysics and Immune Engineering Lab, Sichuan Agricultural University, Ya'an, Sichuan, People's Republic of China.
Jieming ChenBiophysics and Immune Engineering Lab, Sichuan Agricultural University, Ya'an, Sichuan, People's Republic of China.
Yongying SuBiophysics and Immune Engineering Lab, Sichuan Agricultural University, Ya'an, Sichuan, People's Republic of China.
Hanmei LiuBiophysics and Immune Engineering Lab, Sichuan Agricultural University, Ya'an, Sichuan, People's Republic of China.
Yanger ChenBiophysics and Immune Engineering Lab, Sichuan Agricultural University, Ya'an, Sichuan, People's Republic of China.
Peigao LuoState Key Laboratory of Plant breeding and Genetics, Sichuan Agricultural University, Chengdu, Sichuan, People's Republic of China.
Xiaogang DuBiophysics and Immune Engineering Lab, Sichuan Agricultural University, Ya'an, Sichuan, People's Republic of China.
Dan WangDepartment of wheat breeding. Puyang Academy of Agricultural Sciences, Puyang, Henan, People's Republic of China.
Huaiyu ZhangBiophysics and Immune Engineering Lab, Sichuan Agricultural University, Ya'an, Sichuan, People's Republic of China.
Sichuan Agricultural University · CNAnyang Academy of Agricultural Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

LHY (late elongated hypocotyl) is an important gene that regulates and controls biological rhythms in plants. Additionally, LHY is highly expressed in the SSH (suppression subtractive hybridization) cDNA library-induced stripe rust pathogen (CYR32) in our previous research. To identify the function of the LHY gene in disease resistance against stripe rust, we used RACE-PCR technology to clone TaLHY in the wheat variety Chuannong19. The cDNA of TaLHY is 3085 bp long with an open reading frame of 1947 bp. TaLHY is speculated to encode a 70.3 kDa protein of 648 amino acids , which has one typical plant MYB-DNA binding domain; additionally, phylogenetic tree shows that TaLHY has the highest homology with LHY of Brachypodium distachyon(BdLHY-like). Quantitative fluorescence PCR indicates that TaLHY has higher expression in the leaf, ear and stem of wheat but lower expression in the root. Infestation of CYR32 can result in up-regulated expression of TaLHY, peaking at 72 h. Using VIGS (virus-induced gene silencing) technology to disease-resistant wheat in the fourth leaf stage, plants with silenced TaLHY cannot complete their heading stage. Through the compatible interaction with the stripe rust physiological race CYR32, Chuannong 19 loses its immune capability toward the stripe rust pathogen, indicating that TaLHY may regulate and participate in the heading of wheat, as well as the defense responses against stripe rust infection.

Indexed as

BasidiomycotaBase SequenceCloning, MolecularCluster AnalysisDisease ResistanceDNA, ComplementaryDNA PrimersFluorescenceGene SilencingMolecular Sequence DataPhylogenyPlant Components, AerialPlant DiseasesPolymerase Chain ReactionReal-Time Polymerase Chain ReactionSequence Analysis, DNADNA, ComplementaryDNA PrimersTranscription Factors

Identifiers

PMID26010918
PMCPMC4444181
OpenAlexW1524445869

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.