Evidence map›Paper›PMID 26010658›Full record

ArticlePloS one2015

A genome-wide copy number variant study of suicidal behavior.

Jeffrey A Gross, Alexandre Bureau, Jordie Croteau, Hanga Galfalvy, Maria A Oquendo, Fatemeh Haghighi, Chantal Mérette, Ina Giegling, Colin Hodgkinson, David Goldman and 3 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 1 pooled it
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 1 synthesis or guideline pooled it, 32 citations in OpenAlex.

  1. Genetics and epigenetics of self-injurious thoughts and behaviors: Systematic review of the suicide literature and methodological considerations.American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 6 institutions in 3 countries.

Jeffrey A GrossMcGill Group for Suicide Studies, Douglas Mental Health University Institute, Montreal, Quebec, Canada.
Alexandre BureauCentre de recherche de l'Institut Universitaire en Santé Mentale de Québec, Université Laval, Quebec City, Quebec, Canada.
Jordie CroteauCentre de recherche de l'Institut Universitaire en Santé Mentale de Québec, Université Laval, Quebec City, Quebec, Canada.
Hanga GalfalvyDivision of Biostatistics, Department of Psychiatry, Columbia University, New York, New York, United States of America.
Maria A OquendoMolecular Imaging and Neuropathology Division, Department of Psychiatry, Columbia University, New York, New York, United States of America.
Fatemeh HaghighiDivision of Biostatistics, Department of Psychiatry, Columbia University, New York, New York, United States of America.
Chantal MéretteCentre de recherche de l'Institut Universitaire en Santé Mentale de Québec, Université Laval, Quebec City, Quebec, Canada.
Ina GieglingPsychiatric Clinic, Martin-Luther-Universität, Halle, Saxony-Anhalt, Germany.
Colin HodgkinsonLaboratory of Neurogenetics, National Institute on Alcohol Abuse and Alcoholism, National Institutes of Health, Rockville, Maryland, United States of America.
David GoldmanLaboratory of Neurogenetics, National Institute on Alcohol Abuse and Alcoholism, National Institutes of Health, Rockville, Maryland, United States of America.
Dan RujescuPsychiatric Clinic, Martin-Luther-Universität, Halle, Saxony-Anhalt, Germany.
J John MannMolecular Imaging and Neuropathology Division, Department of Psychiatry, Columbia University, New York, New York, United States of America.
Gustavo TureckiMcGill Group for Suicide Studies, Douglas Mental Health University Institute, Montreal, Quebec, Canada.
Columbia University · USDouglas Mental Health University Institute · CAInstitut Universitaire en Santé Mentale de Québec · CAMartin Luther University Halle-Wittenberg · DENational Institutes of Health · USUniversité Laval · CA

Funding

Integrative genetics of behavior with high throughput technologiesZIAAA000301 · NIAAA · NATIONAL INSTITUTE ON ALCOHOL ABUSE AND ALCOHOLISM · PI GOLDMAN, DAVID · 2009 to 2025
$68.6M
Suicidal Behavior in Mood Disorders: Genes and Intermediate PhenotypesR01MH082188 · NIMH · MCGILL UNIVERSITY · PI TURECKI, GUSTAVO · 2008 to 2012
$338k
NIMH NIH HHS R01 MH082188NIMH NIH HHS R01MH082188
6 · The paper itself

Abstract

Suicide and suicide attempts are complex behaviors that result from the interaction of different factors, including genetic variants that increase the predisposition to suicidal behaviors. Copy number variations (CNVs) are deletions or duplications of a segment of DNA usually larger than one kilobase. These structural genetic changes, although quite rare, have been associated with genetic liability to mental disorders, such as autism, schizophrenia, and bipolar disorder. No genome-wide level studies have been published investigating the potential role of CNVs in suicidal behaviors. Based on single-nucleotide polymorphism array data, we followed the Penn-CNV standards to detect CNVs in 1,608 subjects, comprising 475 suicide and suicide attempt cases and 1,133 controls. Although the initial algorithms determined the presence of CNVs on chromosomes 6 and 12 in seven and eight cases, respectively, compared with none of the controls, visual inspection of the raw data did not support this finding. Furthermore we were unable to validate these findings by CNV-specific real-time polymerase chain reaction. Additionally, rare CNV burden analysis did not find an association between the frequency or length of rare CNVs and suicidal behavior in our sample population. Although our findings suggest CNVs do not play an important role in the etiology of suicidal behaviors, they are not inconsistent with the strong evidence from the literature suggesting that other genetic variants account for a portion of the total phenotypic variability in suicidal behavior.

Indexed as

DNA Copy Number VariationsSuicideAdultAlgorithmsFemaleGenome, HumanGenome-Wide Association StudyHumansMalePolymorphism, Single Nucleotide

Identifiers

PMID26010658
PMCPMC4444178
OpenAlexW1554497365

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.