Evidence map›Paper›PMID 26009817›Full record

ArticleShock (Augusta, Ga.)2015

Whole Blood Reveals More Metabolic Detail of the Human Metabolome than Serum as Measured by 1H-NMR Spectroscopy: Implications for Sepsis Metabolomics.

Kathleen A Stringer, John G Younger, Cora McHugh, Larisa Yeomans, Michael A Finkel, Michael A Puskarich, Alan E Jones, Julie Trexel, Alla Karnovsky

Open access · greenAbstract readComparative Study
In one paragraph

Article in Shock (Augusta, Ga.), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 69 citations in OpenAlex.

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  17. Whole-blood metabolomics of dementia patients reveal classes of disease-linked metabolites.Proceedings of the National Academy of Sciences of the United States of America · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Kathleen A Stringer*Department of Clinical Pharmacy and the NMR Metabolomics Laboratory, College of Pharmacy, †Center for Computational Medicine and Bioinformatics, and ‡Department of Emergency Medicine, School of Medicine, University of Michigan, Ann Arbor, Michigan; §Department of Emergency Medicine, University of Mississippi Medical Center, Jackson, Mississippi; and ∥Department of Computational Medicine and Bioinformatics, School of Medicine, University of Michigan, Ann Arbor, Michigan.
John G Younger
Cora McHugh
Larisa Yeomans
Michael A Finkel
Michael A Puskarich
Alan E Jones
Julie Trexel
Alla Karnovsky
University of Michigan–Ann Arbor · USUniversity of Mississippi Medical Center · US

Funding

Complement C5A in Human SepsisR01GM069438 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI YOUNGER, JOHN G · 2004 to 2014
$3.2M
L-carnitine Treatment for Vasopressor Dependent Septic ShockR01GM103799 · NIGMS · UNIVERSITY OF MISSISSIPPI MED CTR · PI JONES, ALAN E · 2012 to 2016
$3.1M
Platelet activation in septic shockK23GM113041 · NIGMS · UNIVERSITY OF MISSISSIPPI MED CTR · PI PUSKARICH, MICHAEL A. · 2015 to 2018
$763k
NIGMS NIH HHS GM113041NIGMS NIH HHS K23 GM113041NIGMS NIH HHS R01 GM069438NIGMS NIH HHS R01 GM069438-07NIGMS NIH HHS R01 GM103799
6 · The paper itself

Abstract

Serum is a common sample of convenience for metabolomics studies. Its processing time can be lengthy and may result in the loss of metabolites including those of red blood cells (RBCs). Unlike serum, whole blood (WB) is quickly processed, minimizing the influence of variable hemolysis while including RBC metabolites. To determine differences between serum and WB metabolomes, both sample types, collected from healthy volunteers, were assayed by H-NMR (proton nuclear magnetic resonance) spectroscopy. A total of 34 and 50 aqueous metabolites were quantified from serum and WB, respectively. Free hemoglobin (Hgb) levels in serum were measured, and the correlation between Hgb and metabolite concentrations was determined. Most metabolites detected in serum were at higher concentrations in WB with the exception of acetoacetate and propylene glycol. The 18 unique metabolites of WB included adenosine, AMP, ADP, and ATP, which are associated with RBC metabolism. The use of serum results in the underrepresentation of a number of metabolic pathways including branched-chain amino acid degradation and glycolysis and gluconeogenesis. The range of free Hgb in serum was 0.03 to 0.01 g/dL, and eight metabolites were associated (P ≤ 0.05) with free Hgb. The range of free Hgb in serum samples from 18 sepsis patients was 0.02 to 0.46 g/dL. Whole blood and serum have unique aqueous metabolite profiles, but the use of serum may introduce potential pathway bias. Use of WB for metabolomics may be particularly important for studies in diseases such as sepsis in which RBC metabolism is altered, and mechanical and sepsis-induced hemolysis contributes to variance in the metabolome.

Indexed as

AdultAgedBlood ProteinsBlood Specimen CollectionFemaleHemoglobinsHemolysisHumansMaleMetabolomeMetabolomicsMiddle AgedProton Magnetic Resonance SpectroscopyReproducibility of ResultsSepsisSerumBlood ProteinsHemoglobins

Identifiers

PMID26009817
PMCPMC4537695
OpenAlexW2403517428

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.