Evidence map›Paper›PMID 26008651›Full record

ArticleProtoplasma2016

Cellular and molecular changes associated with competence acquisition during passion fruit somatic embryogenesis: ultrastructural characterization and analysis of SERK gene expression.

Diego Ismael Rocha, Daniela Lopes Paim Pinto, Lorena Melo Vieira, Francisco André Ossamu Tanaka, Marcelo Carnier Dornelas, Wagner Campos Otoni

Abstract read
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In one paragraph

Article in Protoplasma, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Somatic Embryogenesis in theFrontiers in plant science · 2019
    Review
  8. Expression and DNA methylation ofPhysiology and molecular biology of plants : an international journal of functional plant biology · 2018
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Diego Ismael RochaDepartamento de Biologia Vegetal, Instituto de Biologia, Universidade Estadual de Campinas, Rua Monteiro Lobato 255, Campinas, SP, 13083-862, Brazil.
Daniela Lopes Paim PintoInstitute of Life Sciences, Scuola Superiore Sant'Anna, Piazza Martiri della Libertà, Pisa, TC, 56127, Italy.
Lorena Melo VieiraDepartamento de Biologia Vegetal, Universidade Federal de Viçosa, Av. P.H. Rolfs, Viçosa, MG, 36570-900, Brazil.
Francisco André Ossamu TanakaDepartamento de Fitopatologia e Nematologia, Núcleo de Apoio à Pesquisa em Microscopia Eletrônica Aplicada à Agricultura, Universidade de São Paulo, Piracicaba, SP, 13418-900, Brazil.
Marcelo Carnier DornelasDepartamento de Biologia Vegetal, Instituto de Biologia, Universidade Estadual de Campinas, Rua Monteiro Lobato 255, Campinas, SP, 13083-862, Brazil.
Wagner Campos OtoniDepartamento de Biologia Vegetal, Universidade Federal de Viçosa, Av. P.H. Rolfs, Viçosa, MG, 36570-900, Brazil. wotoni@ufv.br.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The integration of cellular and molecular data is essential for understanding the mechanisms involved in the acquisition of competence by plant somatic cells and the cytological changes that underlie this process. In the present study, we investigated the dynamics and fate of Passiflora edulis Sims cotyledon explants that were committed to somatic embryogenesis by characterizing the associated ultrastructural events and analysing the expression of a putative P. edulis ortholog of the Somatic Embryogenesis Receptor-like Kinase (SERK) gene. Embryogenic calli were obtained from zygotic embryo explants cultured on Murashige and Skoog medium supplemented with 2,4-dichlorophenoxyacetic acid and 6-benzyladenine. Callus formation was initiated by the division of cells derived from the protodermal and subprotodermal cells on the abaxial side of the cotyledons. The isodiametric protodermal cells of the cotyledon explants adopted a columnar shape and became meristematic at the onset of PeSERK expression, which was not initially detected in explant cells. Therefore, we propose that these changes represent the first observable steps towards the acquisition of a competent state within this regeneration system. PeSERK expression was limited to the early stages of somatic embryogenesis; the expression of this gene was confined to proembryogenic zones and was absent in the embryos after the globular stage. Our data also demonstrated that the dynamics of the mobilization of reserve compounds correlated with the differentiation of the embryogenic callus.

Indexed as

Cell DifferentiationGene ExpressionGenes, PlantPassifloraPlant ProteinsPlant Somatic Embryogenesis TechniquesProtein KinasesSeedsPlant ProteinsProtein KinasesCellular competenceIn situ hybridizationReserve mobilizationSERK geneSomatic embryogenesisUltrastructure

Identifiers

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.