ArticleEcotoxicology (London, England)2015
Identification of cold tolerance genes from leaves of mangrove plant Kandelia obovata by suppression subtractive hybridization.
Article in Ecotoxicology (London, England), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.
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Who cites it
11 citing papers in PubMed.
- Comparative Transcriptomics and Metabolomics Analyses ofInternational journal of molecular sciences · 2023Article
- An Aquaporin Gene (Bioengineering (Basel, Switzerland) · 2023Article
- The Kandelia obovata transcription factor KoWRKY40 enhances cold tolerance in transgenic Arabidopsis.BMC plant biology · 2022Article
- Genetic and molecular mechanisms underlying mangrove adaptations to intertidal environments.iScience · 2022Review
- Comprehensive analysis of the NAC transcription factor gene family inFrontiers in plant science · 2022Article
- Genome-Wide Identification ofFrontiers in genetics · 2022Article
- Comparative physiological and proteomic analyses of mangrove plant Kandelia obovata under cold stress.Ecotoxicology (London, England) · 2021Article
- Cloning and characterization of KoOsmotin from mangrove plant Kandelia obovata under cold stress.BMC plant biology · 2021Article
- Isolation and expression analysis of two novel C-repeat binding factor (CBF) genes involved in plant growth and abiotic stress response in mangrove Kandelia obovata.Ecotoxicology (London, England) · 2020Article
- Isolation and expression analysis of a CBF transcriptional factor gene from the mangrove Bruguiera gymnorrhiza.Ecotoxicology (London, England) · 2020Article
- Article
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5 authors.
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Abstract
Low temperature is a major abiotic stress that seriously limits mangrove productivity and distribution, the molecular mechanisms of cold tolerance involved in mangroves are still poorly understood at present. It was used to identify the potential cold-related genes in Kandelia obovata (K. obovata) by suppression subtractive hybridization. 334 cold-related expressed sequence tags (ESTs) out of 670 clones were isolated and sequenced. Among these ESTs, 143 unique cDNAs were identified and classified into ten groups, such as metabolism, energy, cell rescue and defense, transcription and photosynthesis according to NCBI blast. Based on bioinformatics analysis, these ESTs were mainly related to response to stimulus and metabolic process, and were included to 72 KEGG pathways. Two selected genes (e.g., aquaporin gene and zinc family protein gene) from the library were further analyzed by quantitative real-time PCR analysis. Both the two genes were found to be transcriptionally up-regulated under cold stress, which partly approve the construction of the subtractive cDNA library. The diversity of the putative functions of these genes indicated that cold stress resulted in a complex response in K. obovata. Further investigation on the functions and potential pathways of these genes will facilitate the understanding of the molecular adaptations to cold tolerance in mangrove plants.
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