Evidence map›Paper›PMID 26002132›Full record

Observational studyEuropean radiology2016

Normalizing computed tomography data reconstructed with different filter kernels: effect on emphysema quantification.

Leticia Gallardo-Estrella, David A Lynch, Mathias Prokop, Douglas Stinson, Jordan Zach, Philip F Judy, Bram van Ginneken, Eva M van Rikxoort

Open access · hybridAbstract readMulticenter StudyObservational Study
In one paragraph

Observational study in European radiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed, 1 pooled it
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 1 synthesis or guideline pooled it, 81 citations in OpenAlex.

  1. Pooled it
  2. Trial
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  5. Observational
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  13. Development and Application of a Virtual Imaging Trial Framework for Longitudinal Quantification of Emphysema in CT.Proceedings of SPIE--the International Society for Optical Engineering · 2024
    Article
  14. Inter-vendor harmonization of CT reconstruction kernels using unpaired image translation.Proceedings of SPIE--the International Society for Optical Engineering · 2024
    Article
  15. Review
  16. Harmonizing CT Images via Physics-based Deep Neural Networks.Proceedings of SPIE--the International Society for Optical Engineering · 2023
    Article
  17. Influence of Lung Reconstruction Algorithms on Interstitial Lung Pattern Recognition on CT.RoFo : Fortschritte auf dem Gebiete der Rontgenstrahlen und der Nuklearmedizin · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 3 countries.

Leticia Gallardo-EstrellaRadboud University Nijmegen Medical Center, Geert Grooteplein 10 (route 767), P.O. Box 9101, 6500 HB, Nijmegen (766), The Netherlands. Leticia.GallardoEstrella@radboudumc.nl.
David A LynchNational Jewish Health, Denver, CO, USA.
Mathias ProkopRadboud University Nijmegen Medical Center, Geert Grooteplein 10 (route 767), P.O. Box 9101, 6500 HB, Nijmegen (766), The Netherlands.
Douglas StinsonNational Jewish Health, Denver, CO, USA.
Jordan ZachNational Jewish Health, Denver, CO, USA.
Philip F JudyBrigham and Women's Hospital, Boston, MA, USA.
Bram van GinnekenRadboud University Nijmegen Medical Center, Geert Grooteplein 10 (route 767), P.O. Box 9101, 6500 HB, Nijmegen (766), The Netherlands.
Eva M van RikxoortRadboud University Nijmegen Medical Center, Geert Grooteplein 10 (route 767), P.O. Box 9101, 6500 HB, Nijmegen (766), The Netherlands.
Radboud University Nijmegen · NLUniversity of Colorado Denver · USBrigham and Women's Hospital · USFraunhofer Institute for Digital Medicine · DENational Jewish Health · US

Funding

Genetic Epidemiology of COPDU01HL089897 · NHLBI · NATIONAL JEWISH HEALTH · PI CRAPO, JAMES D · 2007 to 2021
$56.9M
Metabolomic signatures of empysema and COPD progression in the COPDGene cohortR01HL089897 · NHLBI · NATIONAL JEWISH HEALTH · PI CRAPO, JAMES D · 2012 to 2016
$31.1M
Genetic Epidemiology of COPDU01HL089856 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI SILVERMAN, EDWIN K · 2007 to 2021
$20.7M
(2 of 2) Genetic Epidemiology of COPDR01HL089856 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI SILVERMAN, EDWIN K · 2012 to 2016
$18.9M
NHLBI NIH HHS R01 HL089856NHLBI NIH HHS R01 HL089897NHLBI NIH HHS U01 HL089856NHLBI NIH HHS U01 HL089897
6 · The paper itself

Abstract

objectivesTo propose and evaluate a method to reduce variability in emphysema quantification among different computed tomography (CT) reconstructions by normalizing CT data reconstructed with varying kernels.

methodsWe included 369 subjects from the COPDGene study. For each subject, spirometry and a chest CT reconstructed with two kernels were obtained using two different scanners. Normalization was performed by frequency band decomposition with hierarchical unsharp masking to standardize the energy in each band to a reference value. Emphysema scores (ES), the percentage of lung voxels below -950 HU, were computed before and after normalization. Bland-Altman analysis and correlation between ES and spirometry before and after normalization were compared. Two mixed cohorts, containing data from all scanners and kernels, were created to simulate heterogeneous acquisition parameters.

resultsThe average difference in ES between kernels decreased for the scans obtained with both scanners after normalization (7.7 ± 2.7 to 0.3 ± 0.7; 7.2 ± 3.8 to -0.1 ± 0.5). Correlation coefficients between ES and FEV1, and FEV1/FVC increased significantly for the mixed cohorts.

conclusionsNormalization of chest CT data reduces variation in emphysema quantification due to reconstruction filters and improves correlation between ES and spirometry. KEY POINTS: • Emphysema quantification is sensitive to the reconstruction kernel used. • Normalization allows comparison of emphysema quantification from images reconstructed with varying kernels. • Normalization allows comparison of emphysema quantification obtained with scanners from different manufacturers. • Normalization improves correlation of emphysema quantification with spirometry. • Normalization can be used to compare data from different studies and centers.

Indexed as

AgedFemaleHumansImage Processing, Computer-AssistedLungMaleMiddle AgedPulmonary EmphysemaReproducibility of ResultsRetrospective StudiesTomography, X-Ray ComputedComputed tomographyCOPDImage reconstructionNormalizationPulmonary emphysema

Identifiers

PMID26002132
PMCPMC4712239
OpenAlexW1490844403

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.