Evidence map›Paper›PMID 26002083›Full record

ArticleeLife2015

Acidic pH and divalent cation sensing by PhoQ are dispensable for systemic salmonellae virulence.

Kevin G Hicks, Scott P Delbecq, Enea Sancho-Vaello, Marie-Pierre Blanc, Katja K Dove, Lynne R Prost, Margaret E Daley, Kornelius Zeth, Rachel E Klevit, Samuel I Miller

Open access · goldAbstract read
In one paragraph

Article in eLife, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. How the PhoP/PhoQ System Controls Virulence and MgMicrobiology and molecular biology reviews : MMBR · 2021
    Review
  7. Article
  8. Review
  9. Article
  10. Osmosensing by the bacterial PhoQ/PhoP two-component system.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  11. Article
  12. Frontiers in microbiology · 2017
    Review
  13. Article
  14. Review
  15. Review
  16. Deciphering tissue-induced Klebsiella pneumoniae lipid A structure.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

Kevin G HicksDepartment of Microbiology, University of Washington Medical School, Seattle, United States.
Scott P DelbecqDepartment of Biochemistry, University of Washington Medical School, Seattle, United States.
Enea Sancho-VaelloUnidad de Biofisica, Centro Mixto Consejo Superior de Investigaciones Cientificas-Universidad del País Vasco/Euskal Herriko Unibertsitatea (CSIC,UPV/EHU), Leioa, Bizkaia, Spain.
Marie-Pierre BlancDepartment of Microbiology, University of Washington Medical School, Seattle, United States.
Katja K DoveDepartment of Biochemistry, University of Washington Medical School, Seattle, United States.
Lynne R ProstDepartment of Biochemistry, University of Wisconsin-Madison, Madison, United States.
Margaret E DaleyDepartment of Chemistry and Biochemistry, University of San Diego, San Diego, United States.
Kornelius ZethDepartment of Biochemistry and Molecular Biology, University of Basque Country, Leioa, Spain.
Rachel E KlevitDepartment of Biochemistry, University of Washington Medical School, Seattle, United States.
Samuel I MillerDepartment of Microbiology, University of Washington Medical School, Seattle, United States.
Seattle University · USUniversity of the Basque Country · ESUniversity of Washington Medical Center · USUniversity of San Diego · USUniversity of Wisconsin–Madison · US

Funding

TRAINING IN MOLECULAR AND CELLULAR BIOLOGYT32GM007270 · NIGMS · UNIVERSITY OF WASHINGTON · PI RAIBLE, DAVID W · 1985 to 2020
$21.0M
ROLE OF THE PHOP REGULON IN SALMONELLA VIRULENCER01AI030479 · NIAID · UNIVERSITY OF WASHINGTON · PI MILLER, SAMUEL I · 1991 to 2014
$5.3M
NIAID NIH HHS R01 AI030479NIAID NIH HHS R01AI030479NIGMS NIH HHS T32 GM007270
6 · The paper itself

Abstract

Salmonella PhoQ is a histidine kinase with a periplasmic sensor domain (PD) that promotes virulence by detecting the macrophage phagosome. PhoQ activity is repressed by divalent cations and induced in environments of acidic pH, limited divalent cations, and cationic antimicrobial peptides (CAMP). Previously, it was unclear which signals are sensed by salmonellae to promote PhoQ-mediated virulence. We defined conformational changes produced in the PhoQ PD on exposure to acidic pH that indicate structural flexibility is induced in α-helices 4 and 5, suggesting this region contributes to pH sensing. Therefore, we engineered a disulfide bond between W104C and A128C in the PhoQ PD that restrains conformational flexibility in α-helices 4 and 5. PhoQ(W104C-A128C) is responsive to CAMP, but is inhibited for activation by acidic pH and divalent cation limitation. phoQ(W104C-A128C) Salmonella enterica Typhimurium is virulent in mice, indicating that acidic pH and divalent cation sensing by PhoQ are dispensable for virulence.

Indexed as

Gene Expression Regulation, BacterialHydrogen-Ion ConcentrationAnimalsBacterial ProteinsCations, DivalentCrystallography, X-RayMiceModels, MolecularMutant ProteinsProtein ConformationSalmonella Infections, AnimalSalmonella typhimuriumVirulenceVirulence FactorsBacterial ProteinsCations, DivalentMutant ProteinsPhoQ protein, BacteriaVirulence Factorsbacterial pathogenesisbiochemistryinfectious diseaseinnate immunityintracellular virulencemicrobiologySalmonellasensor kinasesignal transduction

Identifiers

PMID26002083
PMCPMC4473727
OpenAlexW2171520544

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.