Evidence map›Paper›PMID 26001773›Full record

ArticleAmerican journal of physiology. Lung cellular and molecular physiology2015

Automated acquisition and analysis of airway surface liquid height by confocal microscopy.

Hyun-Chul Choi, Christine Seul Ki Kim, Robert Tarran

Abstract readComparative Study
In one paragraph

Article in American journal of physiology. Lung cellular and molecular physiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.4field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 23 citations in OpenAlex.

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  12. Ion channels of the lung and their role in disease pathogenesis.American journal of physiology. Lung cellular and molecular physiology · 2017
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 3 institutions in 2 countries.

Hyun-Chul ChoiDepartment of Electronic Engineering, Yeungnam University, Kyungsan, Kyungbuk, South Korea; and.
Christine Seul Ki KimCystic Fibrosis Center/Marsico Lung Institute, University of North Carolina, Chapel Hill, North Carolina.
Robert TarranCystic Fibrosis Center/Marsico Lung Institute, University of North Carolina, Chapel Hill, North Carolina tarran@med.unc.edu.
Lung Institute · USUniversity of North Carolina at Chapel Hill · USYeungnam University · KR

Funding

Vector CoreP30DK065988 · NIDDK · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Martina Gentzsch · 2004 to 2026
$26.5M
The Impact of Tobacco Exposure on the Lungs Innate Defense SystemP50HL120100 · NHLBI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI RANDELL, SCOTT H · 2013 to 2017
$21.0M
The Mucus Transport Apparatus: Why Two Layers?P50HL084934 · NHLBI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI BOUCHER, RICHARD CHARLES · 2006 to 2010
$15.6M
SPLUNC1-Derived Peptides as ENaC AntagonistsR01HL108927 · NHLBI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI TARRAN, ROBERT · 2012 to 2015
$1.4M
NHLBI NIH HHS P50 HL084934NHLBI NIH HHS P50 HL120100NHLBI NIH HHS P50HL120100NHLBI NIH HHS R01 HL108927NHLBI NIH HHS R01HL108927NIDDK NIH HHS P30 DK065988NIDDK NIH HHS P30DK065988
6 · The paper itself

Abstract

The airway surface liquid (ASL) is a thin-liquid layer that lines the luminal side of airway epithelia. ASL contains many molecules that are involved in primary innate defense in the lung. Measurement of ASL height on primary airway cultures by confocal microscopy is a powerful tool that has enabled researchers to study ASL physiology and pharmacology. Previously, ASL image acquisition and analysis were performed manually. However, this process is time and labor intensive. To increase the throughput, we have developed an automatic ASL measurement technique that combines a fully automated confocal microscope with novel automatic image analysis software that was written with image processing techniques derived from the computer science field. We were able to acquire XZ ASL images at the rate of ∼ 1 image/s in a reproducible fashion. Our automatic analysis software was able to analyze images at the rate of ∼ 32 ms/image. As proofs of concept, we generated a time course for ASL absorption and a dose response in the presence of SPLUNC1, a known epithelial sodium channel inhibitor, on human bronchial epithelial cultures. Using this approach, we determined the IC50 for SPLUNC1 to be 6.53 μM. Furthermore, our technique successfully detected a difference in ASL height between normal and cystic fibrosis (CF) human bronchial epithelial cultures and detected changes in ATP-stimulated Cl(-)/ASL secretion. We conclude that our automatic ASL measurement technique can be applied for repeated ASL height measurements with high accuracy and consistency and increased throughput.

Indexed as

Adenosine TriphosphateBronchiCells, CulturedCystic FibrosisCystic Fibrosis Transmembrane Conductance RegulatorEpithelial CellsGlycoproteinsHumansIon TransportMicroscopy, ConfocalPhosphoproteinsRespiratory MucosaSodiumAdenosine TriphosphateBPIFA1 protein, humanCystic Fibrosis Transmembrane Conductance RegulatorGlycoproteinsPhosphoproteinsSodiumairway surface liquidCFTRCOPDcystic fibrosisENaCfluorescent microscopy

Identifiers

PMID26001773
PMCPMC4504972
OpenAlexW2296544389

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.