Evidence map›Paper›PMID 26001565›Full record

SynthesisActa neuropathologica communications2015

Induction of a common microglia gene expression signature by aging and neurodegenerative conditions: a co-expression meta-analysis.

Inge R Holtman, Divya D Raj, Jeremy A Miller, Wandert Schaafsma, Zhuoran Yin, Nieske Brouwer, Paul D Wes, Thomas Möller, Marie Orre, Willem Kamphuis and 3 more

Open access · goldAbstract readMeta-Analysis
In one paragraph

Synthesis in Acta neuropathologica communications, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 358 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
358citing papers in PubMed, 2 pooled it
25.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

358 citing papers in PubMed, 2 syntheses or guidelines pooled it, 679 citations in OpenAlex.

  1. Pooled it
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  13. Regional Molecular Diversity in Chronic Spinal Cord Injury.Cellular and molecular neurobiology · 2026
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298 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 7 institutions in 3 countries.

Inge R HoltmanDepartment of Neuroscience, section Medical Physiology, University of Groningen, University Medical Center Groningen, Groningen, The Netherlands. irholtman@gmail.com.
Divya D RajDepartment of Neuroscience, section Medical Physiology, University of Groningen, University Medical Center Groningen, Groningen, The Netherlands. divyaraj18@gmail.com.
Jeremy A MillerAllen Institute for Brain Science, Seattle, USA. jeremyinla@gmail.com.
Wandert SchaafsmaDepartment of Neuroscience, section Medical Physiology, University of Groningen, University Medical Center Groningen, Groningen, The Netherlands. wandertschaafsma@gmail.com.
Zhuoran YinDepartment of Neuroscience, section Medical Physiology, University of Groningen, University Medical Center Groningen, Groningen, The Netherlands. zhuoranyin@163.com.
Nieske BrouwerDepartment of Neuroscience, section Medical Physiology, University of Groningen, University Medical Center Groningen, Groningen, The Netherlands. nieske.brouwer@umcg.nl.
Paul D WesLundbeck Research USA, Paramus, New Jersey, USA. WES@lundbeck.com.
Thomas MöllerLundbeck Research USA, Paramus, New Jersey, USA. TMOE@lundbeck.com.
Marie OrreDepartment of Astrocyte Biology and Neurodegeneration, Netherlands Institute for Neuroscience, Institute of the Royal Netherlands Academy of Arts and Sciences (KNAW), Amsterdam, The Netherlands. marie.orre@gmail.com.
Willem KamphuisDepartment of Astrocyte Biology and Neurodegeneration, Netherlands Institute for Neuroscience, Institute of the Royal Netherlands Academy of Arts and Sciences (KNAW), Amsterdam, The Netherlands. w.kamphuis@nin.knaw.nl.
Elly M HolDepartment of Astrocyte Biology and Neurodegeneration, Netherlands Institute for Neuroscience, Institute of the Royal Netherlands Academy of Arts and Sciences (KNAW), Amsterdam, The Netherlands. e.hol@nin.knaw.nl.
Erik W G M BoddekeDepartment of Neuroscience, section Medical Physiology, University of Groningen, University Medical Center Groningen, Groningen, The Netherlands. h.w.g.m.boddeke@umcg.nl.
Bart J L EggenDepartment of Neuroscience, section Medical Physiology, University of Groningen, University Medical Center Groningen, Groningen, The Netherlands. b.j.l.eggen@umcg.nl.
University Medical Center Groningen · NLNetherlands Institute for Neuroscience · NLUniversity of Groningen · NLAllen Institute for Brain Science · USLundbeck (Denmark) · DKLundbeck (United States) · USRoyal Netherlands Academy of Arts and Sciences · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

introductionMicroglia are tissue macrophages of the central nervous system that monitor brain homeostasis and react upon neuronal damage and stress. Aging and neurodegeneration induce a hypersensitive, pro-inflammatory phenotype, referred to as primed microglia. To determine the gene expression signature of priming, the transcriptomes of microglia in aging, Alzheimer's disease (AD), and amyotrophic lateral sclerosis (ALS) mouse models were compared using Weighted Gene Co-expression Network Analysis (WGCNA).

resultsA highly consistent consensus transcriptional profile of up-regulated genes was identified, which prominently differed from the acute inflammatory gene network induced by lipopolysaccharide (LPS). Where the acute inflammatory network was significantly enriched for NF-κB signaling, the primed microglia profile contained key features related to phagosome, lysosome, antigen presentation, and AD signaling. In addition, specific signatures for aging, AD, and ALS were identified.

conclusionMicroglia priming induces a highly conserved transcriptional signature with aging- and disease-specific aspects.

Indexed as

AgingAlzheimer DiseaseAnimalsHumansInflammationMiceMicrogliaNeurodegenerative DiseasesNF-kappa BSignal TransductionTranscriptomeUp-RegulationNF-kappa B

Identifiers

PMID26001565
PMCPMC4489356
OpenAlexW2102769637

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.