Evidence map›Paper›PMID 25999937›Full record

ArticleFrontiers in microbiology2015

Actinobacterial diversity in limestone deposit sites in Hundung, Manipur (India) and their antimicrobial activities.

Salam Nimaichand, Asem Mipeshwaree Devi, K Tamreihao, Debananda S Ningthoujam, Wen-Jun Li

Abstract read
In one paragraph

Article in Frontiers in microbiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

  1. Review
  2. Antagonistic mechanism ofApplied and environmental microbiology · 2025
    Article
  3. Review
  4. Microbial roles in cave biogeochemical cycling.Frontiers in microbiology · 2022
    Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Isolation ofFrontiers in microbiology · 2020
    Article
  10. Molecular Identification of SelectedInternational journal of environmental research and public health · 2019
    Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Frontiers in microbiology · 2017
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Salam NimaichandMicrobial Biotechnology Research Laboratory, Department of Biochemistry, Manipur University Canchipur, Imphal, India ; State Key Laboratory of Biocontrol and Guangdong Key Laboratory of Plant Resources, School of Life Sciences, Sun Yat-Sen University Guangzhou, China.
Asem Mipeshwaree DeviMolecular Genetics Laboratory, Department of Botany, North-Eastern Hill University Shillong, India.
K TamreihaoMicrobial Biotechnology Research Laboratory, Department of Biochemistry, Manipur University Canchipur, Imphal, India.
Debananda S NingthoujamMicrobial Biotechnology Research Laboratory, Department of Biochemistry, Manipur University Canchipur, Imphal, India.
Wen-Jun LiState Key Laboratory of Biocontrol and Guangdong Key Laboratory of Plant Resources, School of Life Sciences, Sun Yat-Sen University Guangzhou, China ; Yunnan Institute of Microbiology, Yunnan University Kunming, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Studies on actinobacterial diversity in limestone habitats are scarce. This paper reports profiling of actinobacteria isolated from Hundung limestone samples in Manipur, India using ARDRA as the molecular tool for preliminary classification. A total of 137 actinobacteria were clustered into 31 phylotypic groups based on the ARDRA pattern generated and representative of each group was subjected to 16S rRNA gene sequencing. Generic diversity of the limestone isolates consisted of Streptomyces (15 phylotypic groups), Micromonospora (4), Amycolatopsis (3), Arthrobacter (3), Kitasatospora (2), Janibacter (1), Nocardia (1), Pseudonocardia (1) and Rhodococcus (1). Considering the antimicrobial potential of these actinobacteria, 19 showed antimicrobial activities against at least one of the bacterial and candidal test pathogens, while 45 exhibit biocontrol activities against at least one of the rice fungal pathogens. Out of the 137 actinobacterial isolates, 118 were found to have at least one of the three biosynthetic gene clusters (PKS-I, PKS-II, NRPS). The results indicate that 86% of the strains isolated from Hundung limestone deposit sites possessed biosynthetic gene clusters of which 40% exhibited antimicrobial activities. It can, therefore, be concluded that limestone habitat is a promising source for search of novel secondary metabolites.

Indexed as

actinobacterial diversityantibacterialbiocontrolbiosynthetic genesHundunglimestone habitatStreptomyces

Identifiers

PMID25999937
PMCPMC4419841

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.