Evidence map›Paper›PMID 25999696›Full record

ArticleDrug design, development and therapy2015

Prevalence of the CYP2D6*10 (C100T), *4 (G1846A), and *14 (G1758A) alleles among Iranians of different ethnicities.

Ali Bagheri, Behnam Kamalidehghan, Maryam Haghshenas, Parisa Azadfar, Leila Akbari, Mohammad Hossein Sangtarash, Faramarz Vejdandoust, Fatemeh Ahmadipour, Goh Yong Meng, Massoud Houshmand

Registry-linked trialOpen access · goldAbstract read
In one paragraph

Article in Drug design, development and therapy, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT03504631 (Genotyping and Phenotyping of CYP2D6 as Predictor of Z-endoxifen Plasma Levels in Breast Cancer Patients on Tamoxifen Treatment), which is not on this map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.4field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT03504631 unknown statusnot on this mapstarted 2017, after this paper: background citation

Genotyping and Phenotyping of CYP2D6 as Predictor of Z-endoxifen Plasma Levels in Breast Cancer Patients on Tamoxifen Treatment

TypeobservationalSponsorTrisakti UniversityRan2017 to 2018Enrolled117ConditionsBreast Cancer FemaleArmsNo intervention
3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 28 citations in OpenAlex.

  1. Review
  2. Analysis ofIranian journal of medical sciences · 2025
    Article
  3. Article
  4. Leveraging in Vitro Models for Clinically Relevant RareDrug metabolism and disposition: the biological fate of chemicals · 2024
    Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. [Effects of CYP2D6Nan fang yi ke da xue xue bao = Journal of Southern Medical University · 2019
    Article
  12. Genetics and genomic medicine in Iran.Molecular genetics & genomic medicine · 2019
    Article
  13. Clinical Trial:Frontiers in pharmacology · 2019
    Article
  14. Article
  15. Distribution ofJournal of research in medical sciences : the official journal of Isfahan University of Medical Sciences · 2019
    Review
  16. Article
  17. Article
  18. Observational
  19. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 2 countries.

Ali BagheriDepartment of Biology, University of Sistan and Baluchestan, Zahedan, Iran.
Behnam KamalidehghanDepartment of Pharmacy, Faculty of Medicine, University of Malaya, Kuala Lumpur, Malaysia.
Maryam HaghshenasDepartment of Biology, Pardis International Unit, University of Guilan, Rasht, Iran.
Parisa AzadfarDepartment of Biology, Science and Research Branch, Azad University, Tehran, Iran.
Leila AkbariDepartment of Biology, Science and Research Branch, Azad University, Tehran, Iran.
Mohammad Hossein SangtarashDepartment of Biology, University of Sistan and Baluchestan, Zahedan, Iran.
Faramarz VejdandoustDepartment of Biology, Azad University, Ashkezar Branch, Yazd, Iran.
Fatemeh AhmadipourDepartment of Pharmacy, Faculty of Medicine, University of Malaya, Kuala Lumpur, Malaysia.
Goh Yong MengDepartment of Animal Science, Faculty of Veterinary Medicine, Universiti Putra Malaysia, Serdang, Malaysia.
Massoud HoushmandMedical Genetics Department, Special Medical Center, National Institute for Genetic Engineering and Biotechnology (NIGEB), Tehran, Iran ; Medical Genetics Department, National Institute for Genetic Engineering and Biotechnology (NIGEB), Tehran, Iran.
Islamic Azad University, Science and Research Branch · IRUniversity of Malaya · MYUniversity of Sistan and Baluchestan · IRIslamic Azad University, Yazd · IRNational Institute of Genetic Engineering and Biotechnology · IRUniversiti Putra Malaysia · MY

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The presence of polymorphisms in the CYP2D6 gene may modulate enzyme level and activity, thereby affecting individual responses to pharmacological treatment. Here, we compared the prevalence of the CYP2D6*10, *4, and 14* alleles in an Iranian population of different ethnicities with those of other populations. Allele and genotype frequency distributions of CYP2D6*10 variants and predicted phenotypes including extensive metabolizers, intermediate metabolizers, and poor metabolizers were analysed in blood samples of 300 unrelated healthy individuals in an Iranian population using polymerase chain reaction (PCR)-restriction fragment length polymorphism, PCR-single-strand conformation polymorphism, and direct genomic DNA sequencing. The CYP2D6*4 (G1846A) and *14 (G1758A) allelic frequencies were not detected in different ethnicities, demonstrating the absence of a significant contribution of these alleles in Iranian populations. However, the T/T, C/T, and C/C genotype frequencies of the CYP2D6*10 allele were significantly different (P<0.01) in all Iranian ethnic groups. Additionally, the frequency of the homozygous T/T variant of the CYP2D6*10 allele was significantly high in the Lure (P<0.017) and low in the Kurd (P<0.002) ethnicities. The frequency of the T/T variant of the CYP2D6*10 allele in central Iran was the highest (P<0.001), while the south of Iran had the lowest frequency (P<0.001). The frequency of the C/T variant of the CYP2D6*10 allele was significantly a bit high (P<0.001) in females compare to males, while the frequencies of the T/T variant in females is similar to males, which are 24.4% and 24.3%, respectively. In contrast to absence of the CYP2D6*4 (G1846A) and *14 (G1758A) alleles in Iranian populations of different ethnicities, the prediction of the CYP2D6*10 allele is required in drug research and routine treatment, where the information would be helpful for clinicians to optimize therapy or identify persons at risk of adverse drug reactions before clinical trials. Approximately 39.3% of subjects (24.3% homozygous T/T CYP2D6*10 as poor metabolizers and 15% heterozygous C/T CYP2D6*10 as intermediate metabolizers) had this allele; therefore, the harmful effects of drugs are relatively common among Iranians.

Indexed as

AdultAllelesAmino Acid SequenceAnimalsBase SequenceCytochrome P-450 CYP2D6DNAEthnicityFemaleGene FrequencyHumansIranMaleMolecular Sequence DataPhenotypePolymorphism, Restriction Fragment LengthCytochrome P-450 CYP2D6DNAantidepressantsantipsychoticsCYPcytochrome P450 genesIranian populationpharmacogeneticspolymorphism

Identifiers

PMID25999696
PMCPMC4435087
OpenAlexW1591596980

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.