Evidence map›Paper›PMID 25997110›Full record

ReviewLife (Basel, Switzerland)2015

Horizontal gene transfer, dispersal and haloarchaeal speciation.

R Thane Papke, Paulina Corral, Nikhil Ram-Mohan, Rafael R de la Haba, Cristina Sánchez-Porro, Andrea Makkay, Antonio Ventosa

Abstract readReview
In one paragraph

Review in Life (Basel, Switzerland), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
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  9. Article
  10. Genome-based analyses reveal a synonymy amongInternational journal of systematic and evolutionary microbiology · 2020
    Article
  11. Article
  12. Article
  13. A Halocin Promotes DNA Uptake inFrontiers in microbiology · 2019
    Article
  14. Article
  15. Structure and role for active site lid of lactate monooxygenase from Mycobacterium smegmatis.Protein science : a publication of the Protein Society · 2019
    Article
  16. Article
  17. Article
  18. Mechanisms of gene flow in archaea.Nature reviews. Microbiology · 2017
    Review
  19. Abiotic Gene Transfer: Rare or Rampant?The Journal of membrane biology · 2016
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

R Thane PapkeDepartment of Molecular and Cell Biology, University of Connecticut, Storrs, CT 06269, USA. thane@uconn.edu.
Paulina CorralDepartment of Microbiology and Parasitology, University of Seville, 41004 Seville, Spain. pcv@us.es.
Nikhil Ram-MohanDepartment of Molecular and Cell Biology, University of Connecticut, Storrs, CT 06269, USA.
Rafael R de la HabaDepartment of Microbiology and Parasitology, University of Seville, 41004 Seville, Spain. rrh@us.es.
Cristina Sánchez-PorroDepartment of Microbiology and Parasitology, University of Seville, 41004 Seville, Spain. sanpor@us.es.
Andrea MakkayDepartment of Molecular and Cell Biology, University of Connecticut, Storrs, CT 06269, USA. andrea.makkay@uconn.edu.
Antonio VentosaDepartment of Microbiology and Parasitology, University of Seville, 41004 Seville, Spain. ventosa@us.es.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Halobacteria are a well-studied archaeal class and numerous investigations are showing how their diversity is distributed amongst genomes and geographic locations. Evidence indicates that recombination between species continuously facilitates the arrival of new genes, and within species, it is frequent enough to spread acquired genes amongst all individuals in the population. To create permanent independent diversity and generate new species, barriers to recombination are probably required. The data support an interpretation that rates of evolution (e.g., horizontal gene transfer and mutation) are faster at creating geographically localized variation than dispersal and invasion are at homogenizing genetic differences between locations. Therefore, we suggest that recurrent episodes of dispersal followed by variable periods of endemism break the homogenizing forces of intrapopulation recombination and that this process might be the principal stimulus leading to divergence and speciation in Halobacteria.

Indexed as

biogeographyHaloarchaeahomologous recombinationhorizontal gene transferpopulation geneticsspeciation

Identifiers

PMID25997110
PMCPMC4500145

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.