Evidence map›Paper›PMID 25995475›Full record

ArticleThe Journal of neuroscience : the official journal of the Society for Neuroscience2015

A structural and genotypic scaffold underlying temporal integration.

Melanie M Lee, Aristides B Arrenberg, Emre R F Aksay

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of neuroscience : the official journal of the Society for Neuroscience, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.9field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 29 citations in OpenAlex.

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  7. ZebrafishThe Journal of neuroscience : the official journal of the Society for Neuroscience · 2020
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  15. Adaptive Acceleration of Visually Evoked Smooth Eye Movements in Mice.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2016
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Melanie M LeeInstitute for Computational Biomedicine and the Department of Physiology and Biophysics, Weill Cornell Medical College, New York, New York 10021, and.ORCID http://orcid.org/0000-0002-8498-0733
Aristides B ArrenbergDevelopmental Biology, Institute Biology 1, Faculty of Biology and Center for Biological Signaling Studies, University of Freiburg, D-79104, Freiburg, Germany.ORCID http://orcid.org/0000-0001-8262-7381
Emre R F AksayInstitute for Computational Biomedicine and the Department of Physiology and Biophysics, Weill Cornell Medical College, New York, New York 10021, and ema2004@med.cornell.edu.ORCID http://orcid.org/0000-0002-4561-4175
Cornell University · USUniversity of Freiburg · DE

Funding

The computational importance of cerebellar processingR01EY021581 · NEI · WEILL MEDICAL COLL OF CORNELL UNIV · PI AKSAY, EMRE R · 2012 to 2016
$2.8M
NEI NIH HHS R01 EY021581
6 · The paper itself

Abstract

The accumulation and storage of information over time, temporal integration, is key to numerous behaviors. Many oculomotor tasks depend on integration of eye-velocity signals to eye-position commands, a transformation achieved by a hindbrain cell group termed the velocity-to-position neural integrator (VPNI). Although the VPNI's coding properties have been well characterized, its mechanism of function remains poorly understood because few links exist between neuronal activity, structure, and genotypic identity. To fill this gap, we used calcium imaging and single-cell electroporation during oculomotor behaviors to map VPNI neural activity in zebrafish onto a hindbrain scaffold consisting of alternating excitatory and inhibitory parasagittal stripes. Three distinct classes of VPNI cells were identified. One glutamatergic class was medially located along a stripe associated with the alx transcription factor; these cells had ipsilateral projections terminating near abducens motoneurons and collateralized extensively within the ipsilateral VPNI in a manner consistent with integration through recurrent excitation. A second glutamatergic class was more laterally located along a stripe associated with transcription factor dbx1b; these glutamatergic cells had contralateral projections collateralizing near abducens motoneurons, consistent with a role in disconjugate eye movements. A third class, immunohistochemically suggested to be GABAergic, was located primarily in the dbx1b stripe and also had contralateral projections terminating near abducens motoneurons; these cells collateralized extensively in the dendritic field of contralateral VPNI neurons, consistent with a role in coordinating activity between functionally opposing populations. This mapping between VPNI activity, structure, and genotype may provide a blueprint for understanding the mechanisms governing temporal integration.

Indexed as

Eye MovementsGenotypeAnimalsEye ProteinsFemaleGABAergic NeuronsHomeodomain ProteinsMaleMotor NeuronsRhombencephalonTranscription FactorsZebrafishZebrafish Proteinsdbx1b protein, zebrafishEye ProteinsHomeodomain ProteinsTranscription Factorsvsx2 protein, zebrafishZebrafish Proteinseye movementsmicrocircuitneural integratorpatterningpersistent activitytemporal integration

Identifiers

PMID25995475
PMCPMC4438132
OpenAlexW1870345950

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.