Evidence map›Paper›PMID 25995385›Full record

ArticleMolecular cancer research : MCR2015

Transposon Mutagenesis Screen Identifies Potential Lung Cancer Drivers and CUL3 as a Tumor Suppressor.

Casey Dorr, Callie Janik, Madison Weg, Raha A Been, Justin Bader, Ryan Kang, Brandon Ng, Lindsey Foran, Sean R Landman, M Gerard O'Sullivan and 5 more

Open access · bronzeAbstract read
In one paragraph

Article in Molecular cancer research : MCR, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
3.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 48 citations in OpenAlex.

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  19. CRISPR/Cas9 Genetic Modification ofDrug metabolism and disposition: the biological fate of chemicals · 2017
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 1 institution in 1 country.

Casey DorrDepartment of Obstetrics, Gynecology and Women's Health, University of Minnesota, Minneapolis, Minnesota. Masonic Cancer Center, University of Minnesota, Minneapolis, Minnesota. Minneapolis Medical Research Foundation, Minneapolis, Minnesota.
Callie JanikDepartment of Obstetrics, Gynecology and Women's Health, University of Minnesota, Minneapolis, Minnesota.
Madison WegDepartment of Obstetrics, Gynecology and Women's Health, University of Minnesota, Minneapolis, Minnesota.
Raha A BeenMasonic Cancer Center, University of Minnesota, Minneapolis, Minnesota. Department of Comparative and Molecular Biosciences, University of Minnesota, St. Paul, Minnesota.
Justin BaderMassachusetts Institute of Technology, Cambridge, Massachusetts.
Ryan KangDepartment of Obstetrics, Gynecology and Women's Health, University of Minnesota, Minneapolis, Minnesota.
Brandon NgDepartment of Obstetrics, Gynecology and Women's Health, University of Minnesota, Minneapolis, Minnesota.
Lindsey ForanDepartment of Obstetrics, Gynecology and Women's Health, University of Minnesota, Minneapolis, Minnesota.
Sean R LandmanDepartment of Computer Science and Engineering, University of Minnesota, Minneapolis, Minnesota.
M Gerard O'SullivanDepartment of Veterinary Population Medicine, College of Veterinary Medicine, University of Minnesota, St. Paul, Minnesota. Comparative Pathology Shared Resource, Masonic Cancer Center, University of Minnesota, Minneapolis, Minnesota.
Michael SteinbachDepartment of Computer Science and Engineering, University of Minnesota, Minneapolis, Minnesota.
Aaron L SarverDepartment of Obstetrics, Gynecology and Women's Health, University of Minnesota, Minneapolis, Minnesota.
Kevin A T SilversteinMinnesota Supercomputing Institute, University of Minnesota, Minneapolis, Minnesota.
David A LargaespadaMasonic Cancer Center, University of Minnesota, Minneapolis, Minnesota. Department of Genetic, Cell Biology and Development, University of Minnesota, Minneapolis, Minnesota.
Timothy K StarrDepartment of Obstetrics, Gynecology and Women's Health, University of Minnesota, Minneapolis, Minnesota. Masonic Cancer Center, University of Minnesota, Minneapolis, Minnesota. Department of Genetic, Cell Biology and Development, University of Minnesota, Minneapolis, Minnesota. star0044@umn.edu.
University of Minnesota · US

Funding

Women's CancerP30CA077598 · NCI · UNIVERSITY OF MINNESOTA TWIN CITIES · PI Jeffrey S. Miller · 1998 to 2026
$100.4M
TRAINING GRANT IN MICROBIOLOGY/CANCER RESEARCHT32CA009138 · NCI · UNIVERSITY OF MINNESOTA TWIN CITIES · PI Scott M. Dehm · 1985 to 2026
$11.3M
Sleeping Beauty for uncovering cancer genes in miceR01CA113636 · NCI · UNIVERSITY OF MINNESOTA · PI LARGAESPADA, DAVID ANDREW · 2006 to 2016
$2.5M
Postdoctoral Training Program in Duluth, MinnesotaK12GM074628 · NIGMS · UNIVERSITY OF MINNESOTA · PI TRACHTE, GEORGE J · 2007 to 2011
$1.5M
Cancer gene discovery using Sleeping Beauty transposon-mediated mutagenesisR00CA151672 · NCI · UNIVERSITY OF MINNESOTA · PI STARR, TIMOTHY KAEHLER · 2011 to 2013
$710k
Cancer gene discovery using Sleeping Beauty transposon-mediated mutagenesisK99CA151672 · NCI · UNIVERSITY OF MINNESOTA · PI STARR, TIMOTHY KAEHLER · 2010 to 2010
$102k
Intramural NIH HHSNCI NIH HHS 2-T32-CA009138-36NCI NIH HHS 5R00CA151672-04NCI NIH HHS 5-T32-CA009138-37NCI NIH HHS K99 CA151672NCI NIH HHS P30 CA077598NCI NIH HHS P30-CA77598NCI NIH HHS R00 CA151672NCI NIH HHS R01 CA113636NCI NIH HHS T32 CA009138NIGMS NIH HHS 3-K12-GM074628-03-S1NIGMS NIH HHS K12 GM074628
6 · The paper itself

Abstract

unlabelledNon-small cell lung cancers (NSCLC) harbor thousands of passenger events that hide genetic drivers. Even highly recurrent events in NSCLC, such as mutations in PTEN, EGFR, KRAS, and ALK, are detected, at most, in only 30% of patients. Thus, many unidentified low-penetrant events are causing a significant portion of lung cancers. To detect low-penetrance drivers of NSCLC, a forward genetic screen was performed in mice using the Sleeping Beauty (SB) DNA transposon as a random mutagen to generate lung tumors in a Pten-deficient background. SB mutations coupled with Pten deficiency were sufficient to produce lung tumors in 29% of mice. Pten deficiency alone, without SB mutations, resulted in lung tumors in 11% of mice, whereas the rate in control mice was approximately 3%. In addition, thyroid cancer and other carcinomas, as well as the presence of bronchiolar and alveolar epithelialization, in mice deficient for Pten were also identified. Analysis of common transposon insertion sites identified 76 candidate cancer driver genes. These genes are frequently dysregulated in human lung cancers and implicate several signaling pathways. Cullin3 (Cul3), a member of a ubiquitin ligase complex that plays a role in the oxidative stress response pathway, was identified in the screen and evidence demonstrates that Cul3 functions as a tumor suppressor. IMPLICATIONS: This study identifies many novel candidate genetic drivers of lung cancer and demonstrates that CUL3 acts as a tumor suppressor by regulating oxidative stress.

Indexed as

DNA Transposable ElementsGenes, Tumor SuppressorMutagenesisAnimalsCarcinoma, Non-Small-Cell LungCell Line, TumorCell ProliferationCullin ProteinsFemaleHEK293 CellsHumansKaplan-Meier EstimateLung NeoplasmsMiceMice, Inbred C57BLMice, TransgenicCUL3 protein, humanCul3 protein, mouseCullin ProteinsDNA Transposable Elements

Identifiers

PMID25995385
PMCPMC4543426
OpenAlexW2096334610

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.